RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 CYP8B1Q9UNU6 501 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 F6X3S4 739 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 FSCN2O14926 492 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 LMNB1P20700 586 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 BMP6P22004 513 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 ARNTP27540 789 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 TNNI2P48788 182 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 DGKGP49619 791 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 LRRC14Q15048 493 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 SREK1Q8WXA9 508 aaKnown RBP6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
HMGB1P16-201ENST00000447155 PF4P02776 101 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 GJA8P48165 433 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 PAK2Q13177 524 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 DMRTC2Q8IXT2 367 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 NEDD1Q8NHV4 660 aa6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
HMGB1P16-201ENST00000447155 CYP11A1P05108 521 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 GSTM4Q03013 218 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 CAMK2GQ13555 558 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 RASIP1Q5U651 963 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 LLGL2Q6P1M3 1020 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 CCDC84Q86UT8 332 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 SVOPQ8N4V2 548 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 ZNF296Q8WUU4 475 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 CBX8Q9HC52 389 aa6.87□□□□□ -1.31
HMGB1P16-201ENST00000447155 GARTP22102 1010 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 FAM160A1Q05DH4 1040 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 ZNF252P-AS1Q0IIN9 211 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 SUZ12Q15022 739 aaKnown RBP6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 SNAP47Q5SQN1 464 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 FBXL19Q6PCT2 694 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 VPS37DQ86XT2 251 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 DCAF11Q8TEB1 546 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 KLHDC7BQ96G42 594 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 DRC1Q96MC2 740 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 GMLQ99445 158 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 NT5C1AQ9BXI3 368 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 USP35Q9P2H5 1018 aa6.86□□□□□ -1.31
HMGB1P16-201ENST00000447155 GREM1O60565 184 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 IGSF3O75054 1194 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 TRIM37O94972 964 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 ARID5AQ03989 594 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 POU4F3Q15319 338 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 GOLM1Q8NBJ4 401 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 CORO1BQ9BR76 489 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 NRSN2Q9GZP1 204 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 MIR1-1HGQ9H1L0 117 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 PCDHB5Q9Y5E4 795 aa6.85□□□□□ -1.31
HMGB1P16-201ENST00000447155 ROBO2Q9HCK4 1378 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 TM4SF5O14894 197 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 ARHGEF15O94989 841 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 HNRNPUQ00839 825 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 GRIN3AQ8TCU5 1115 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 GATAD2BQ8WXI9 593 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 KRT82Q9NSB4 513 aa6.84□□□□□ -1.31
HMGB1P16-201ENST00000447155 PIK3R2O00459 728 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 WIPF1O43516 503 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 MAOBP27338 520 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 CD68P34810 354 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 RAC1P63000 192 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 SEPT6Q14141 434 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms