RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 TEX11Q8IYF3 940 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 GPC2Q8N158 579 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
LIN54-203ENST00000446851 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
LIN54-203ENST00000446851 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
LIN54-203ENST00000446851 TTF1Q15361 905 aaPredicted RBP12.39□□□□□ -0.43
LIN54-203ENST00000446851 AMOTL1Q8IY63 956 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 MECOMQ03112 1051 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 TDRD7Q8NHU6 1098 aaKnown RBP12.39□□□□□ -0.43
LIN54-203ENST00000446851 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 ARMT1Q9H993 441 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
LIN54-203ENST00000446851 EGFRP00533 1210 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 BTDP43251 543 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 CRKP46108 304 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
LIN54-203ENST00000446851 FGD1P98174 961 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 USP48Q86UV5 1035 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 MYOZ2Q9NPC6 264 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
LIN54-203ENST00000446851 MBD4O95243 580 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 FGFR2P21802 821 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
LIN54-203ENST00000446851 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
LIN54-203ENST00000446851 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
LIN54-203ENST00000446851 GSTO1P78417 241 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 CACNA1FO60840 1977 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
LIN54-203ENST00000446851 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
LIN54-203ENST00000446851 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 HAND2P61296 217 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 GLIS2Q9BZE0 524 aaPredicted RBP12.37□□□□□ -0.43
LIN54-203ENST00000446851 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
LIN54-203ENST00000446851 NF2P35240 595 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 SLC4A4Q9Y6R1 1079 aa12.37□□□□□ -0.43
LIN54-203ENST00000446851 PDE4AP27815 886 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 ATP5JP18859 108 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 PDE6AP16499 860 aa12.36□□□□□ -0.43
LIN54-203ENST00000446851 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.43
LIN54-203ENST00000446851 SDSP20132 328 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
LIN54-203ENST00000446851 MAST3O60307 1309 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 FZD9O00144 591 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 TRAF5O00463 557 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
LIN54-203ENST00000446851 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
LIN54-203ENST00000446851 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 RGPD3A6NKT7 1758 aaPredicted RBP12.34□□□□□ -0.43
LIN54-203ENST00000446851 RGPD4Q7Z3J3 1758 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 TNNI2P48788 182 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 NAPBQ9H115 298 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
LIN54-203ENST00000446851 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
LIN54-203ENST00000446851 RUFY2Q8WXA3 655 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
LIN54-203ENST00000446851 TAF1DQ9H5J8 278 aaPredicted RBP12.34□□□□□ -0.43
LIN54-203ENST00000446851 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
LIN54-203ENST00000446851 WNT10BO00744 389 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 IL1R1P14778 569 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 HTRA3P83110 453 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 HAUS7Q99871 368 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.43
LIN54-203ENST00000446851 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 PRKAB2O43741 272 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
LIN54-203ENST00000446851 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
LIN54-203ENST00000446851 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 SEMA3EO15041 775 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
LIN54-203ENST00000446851 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
LIN54-203ENST00000446851 RASA3Q14644 834 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
LIN54-203ENST00000446851 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
LIN54-203ENST00000446851 DAGLAQ9Y4D2 1042 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms