RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 RAD50Q92878 1312 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 FAM83GA6ND36 823 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 STX10O60499 249 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 TNNT1P13805 278 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 STRN3Q13033 797 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 FNBP1Q96RU3 617 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
FN1-212ENST00000446046 POLR3GO15318 223 aaPredicted RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 AKR1B10O60218 316 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 MMRN2Q9H8L6 949 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 CACNA1FO60840 1977 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 APBA3O96018 575 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 UBE4AQ14139 1066 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 NR1I2O75469 434 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 UBASH3AP57075 661 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
FN1-212ENST00000446046 RBM8AQ9Y5S9 174 aaKnown RBP13.22□□□□□ -0.29
FN1-212ENST00000446046 KDM5DQ9BY66 1539 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 HOXC9P31274 260 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 Q6ZUG5 572 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
FN1-212ENST00000446046 NEK11Q8NG66 645 aa13.21□□□□□ -0.29
FN1-212ENST00000446046 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
FN1-212ENST00000446046 ARL1P40616 181 aaPredicted RBP13.21□□□□□ -0.29
FN1-212ENST00000446046 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
FN1-212ENST00000446046 ITSN1Q15811 1721 aa13.21□□□□□ -0.29
FN1-212ENST00000446046 KRT83P78385 493 aa13.21□□□□□ -0.29
FN1-212ENST00000446046 CEP112Q8N8E3 955 aa13.21□□□□□ -0.29
FN1-212ENST00000446046 ZNF165P49910 485 aa13.21□□□□□ -0.3
FN1-212ENST00000446046 TMEM87BQ96K49 555 aa13.21□□□□□ -0.3
FN1-212ENST00000446046 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.3
FN1-212ENST00000446046 AZI2Q9H6S1 392 aa13.21□□□□□ -0.3
FN1-212ENST00000446046 URI1O94763 535 aaPredicted RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 TET3O43151 1660 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 STK10O94804 968 aaKnown RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 PLCD1P51178 756 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 NDC80O14777 642 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 KDM6BO15054 1643 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
FN1-212ENST00000446046 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
FN1-212ENST00000446046 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.31e-65■□□□□ 8.5
FN1-212ENST00000446046 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 P4HA1P13674 534 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 PDE1AP54750 535 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 HSPA2P54652 639 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 TUBB4AP04350 444 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 SPATA24Q86W54 205 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 CDC42BPBQ9Y5S2 1711 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
FN1-212ENST00000446046 CNGA1P29973 690 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 TTC16Q8NEE8 873 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 NACA2Q9H009 215 aa13.19□□□□□ -0.3
FN1-212ENST00000446046 HSF2BPO75031 334 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 NSRP1Q9H0G5 558 aaKnown RBP13.18□□□□□ -0.3
FN1-212ENST00000446046 ITGA6P23229 1130 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 CFAP58Q5T655 872 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 KAT6AQ92794 2004 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 KRT86O43790 486 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 KIF5AQ12840 1032 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms