RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
ERCC3-203ENST00000445889 CFAP100Q494V2 611 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
ERCC3-203ENST00000445889 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 ARHGAP29Q52LW3 1261 aa16.47■□□□□ 0.23
ERCC3-203ENST00000445889 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
ERCC3-203ENST00000445889 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
ERCC3-203ENST00000445889 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-203ENST00000445889 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
ERCC3-203ENST00000445889 UBASH3AP57075 661 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 HSD3B7Q9H2F3 369 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 LMO7Q8WWI1 1683 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 URI1O94763 535 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-203ENST00000445889 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 SYKP43405 635 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 NLRP12P59046 1061 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-203ENST00000445889 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
ERCC3-203ENST00000445889 ZNF213O14771 459 aa16.46■□□□□ 0.22
ERCC3-203ENST00000445889 DCAF5Q96JK2 942 aa16.46■□□□□ 0.22
ERCC3-203ENST00000445889 A0A1W2PQ27 194 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 A0A1W2PQ64 194 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 A0A1W2PQD8 194 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 MEGF6O75095 1541 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 CLCN6P51797 869 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-203ENST00000445889 PDILTQ8N807 584 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 GPAA1O43292 621 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 SEC31AO94979 1220 aaKnown RBP16.45■□□□□ 0.22
ERCC3-203ENST00000445889 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-203ENST00000445889 CMTR1Q8N1G2 835 aaKnown RBP16.45■□□□□ 0.22
ERCC3-203ENST00000445889 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
ERCC3-203ENST00000445889 CDC27P30260 824 aa16.44■□□□□ 0.22
ERCC3-203ENST00000445889 VPS37DQ86XT2 251 aa16.44■□□□□ 0.22
ERCC3-203ENST00000445889 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-203ENST00000445889 POLR3GO15318 223 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-203ENST00000445889 LONRF3Q496Y0 759 aa16.44■□□□□ 0.22
ERCC3-203ENST00000445889 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
ERCC3-203ENST00000445889 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
ERCC3-203ENST00000445889 B4E1Z4 1266 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■■□ 21.3
ERCC3-203ENST00000445889 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
ERCC3-203ENST00000445889 GRIN1Q05586 938 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 PDE4BQ07343 736 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 MRC1P22897 1456 aa16.43■□□□□ 0.22
ERCC3-203ENST00000445889 YEATS4O95619 227 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
ERCC3-203ENST00000445889 SNAP23O00161 211 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 CMA1P23946 247 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 GPTP24298 496 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 ADKP55263 362 aaKnown RBP16.42■□□□□ 0.22
ERCC3-203ENST00000445889 TPM4P67936 248 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 KRT40Q6A162 431 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 ZSWIM4Q9H7M6 989 aa16.42■□□□□ 0.22
ERCC3-203ENST00000445889 ZCCHC17Q9NP64 241 aaKnown RBP16.42■□□□□ 0.22
ERCC3-203ENST00000445889 C5P01031 1676 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 LAMA4Q16363 1823 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 KIF2AO00139 706 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-203ENST00000445889 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
ERCC3-203ENST00000445889 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
ERCC3-203ENST00000445889 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 SLC9C2Q5TAH2 1124 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 NFXL1Q6ZNB6 911 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 NRDCO43847 1150 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 BMP6P22004 513 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 ETF1P62495 437 aaKnown RBP16.41■□□□□ 0.22
ERCC3-203ENST00000445889 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 UBXN4Q92575 508 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 L2HGDHQ9H9P8 463 aa16.41■□□□□ 0.22
ERCC3-203ENST00000445889 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-203ENST00000445889 DESI2Q9BSY9 194 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 FHOD1Q9Y613 1164 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
ERCC3-203ENST00000445889 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-203ENST00000445889 TRIM65Q6PJ69 517 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
ERCC3-203ENST00000445889 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 MNS1Q8NEH6 495 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-203ENST00000445889 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
ERCC3-203ENST00000445889 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms