RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 RNF19BQ6ZMZ0 732 aa10.34□□□□□ -0.75
LINC02549-201ENST00000445346 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
LINC02549-201ENST00000445346 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
LINC02549-201ENST00000445346 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
LINC02549-201ENST00000445346 CASP8AP2Q9UKL3 1982 aa10.34□□□□□ -0.75
LINC02549-201ENST00000445346 ADM5C9JUS6 153 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 ECE2O60344 883 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 TRPA1O75762 1119 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 GPSM2P81274 684 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 NEUROD2Q15784 382 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 CELF1Q92879 486 aaKnown RBP10.33□□□□□ -0.76
LINC02549-201ENST00000445346 FAM89AQ96GI7 184 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 ZC3H12CQ9C0D7 883 aaKnown RBP10.33□□□□□ -0.76
LINC02549-201ENST00000445346 SAGE1Q9NXZ1 904 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
LINC02549-201ENST00000445346 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 EGFRP00533 1210 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
LINC02549-201ENST00000445346 KIF4BQ2VIQ3 1234 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
LINC02549-201ENST00000445346 PLBD2Q8NHP8 589 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 POLLQ9UGP5 575 aa10.32□□□□□ -0.76
LINC02549-201ENST00000445346 FAM155AB1AL88 458 aaPredicted RBP10.31□□□□□ -0.76
LINC02549-201ENST00000445346 SOX10P56693 466 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 RPS8P62241 208 aaKnown RBP10.31□□□□□ -0.76
LINC02549-201ENST00000445346 SF3B3Q15393 1217 aaKnown RBP10.31□□□□□ -0.76
LINC02549-201ENST00000445346 KRT24Q2M2I5 525 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 HDGFL1Q5TGJ6 251 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 PPP1R18Q6NYC8 613 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
LINC02549-201ENST00000445346 IRS4O14654 1257 aaPredicted RBP10.3□□□□□ -0.76
LINC02549-201ENST00000445346 HOXA2O43364 376 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
LINC02549-201ENST00000445346 TBC1D16Q8TBP0 767 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 SPIRE2Q8WWL2 714 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 CDCA5Q96FF9 252 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 DBF4Q9UBU7 674 aaPredicted RBP10.3□□□□□ -0.76
LINC02549-201ENST00000445346 PCDHGC3Q9UN70 934 aa10.3□□□□□ -0.76
LINC02549-201ENST00000445346 CHL1O00533 1208 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 UFL1O94874 794 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 VIL1P09327 827 aaKnown RBP10.29□□□□□ -0.76
LINC02549-201ENST00000445346 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 SCARF1Q14162 830 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 CTU1Q7Z7A3 348 aaKnown RBP10.29□□□□□ -0.76
LINC02549-201ENST00000445346 CCDC146Q8IYE0 955 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 FAM160A2Q8N612 972 aaPredicted RBP10.29□□□□□ -0.76
LINC02549-201ENST00000445346 CSRNP1Q96S65 589 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 ISCA1Q9BUE6 129 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 HYPKQ9NX55 129 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 HDAC9Q9UKV0 1011 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 ANKRD36CQ5JPF3 1778 aa10.29□□□□□ -0.76
LINC02549-201ENST00000445346 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
LINC02549-201ENST00000445346 DUOX1Q9NRD9 1551 aa10.28□□□□□ -0.76
LINC02549-201ENST00000445346 KDM4AO75164 1064 aa10.28□□□□□ -0.76
LINC02549-201ENST00000445346 NDUFV2P19404 249 aa10.28□□□□□ -0.76
LINC02549-201ENST00000445346 ANGEL2Q5VTE6 544 aaKnown RBP10.28□□□□□ -0.76
LINC02549-201ENST00000445346 ZBTB38Q8NAP3 1195 aaPredicted RBP10.28□□□□□ -0.76
LINC02549-201ENST00000445346 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
LINC02549-201ENST00000445346 PRR14Q9BWN1 585 aa10.28□□□□□ -0.76
LINC02549-201ENST00000445346 ASTN2O75129 1339 aaPredicted RBP10.28□□□□□ -0.76
LINC02549-201ENST00000445346 LAMB2P55268 1798 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 S1PR4O95977 384 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 HOXB7P09629 217 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 TRIM28Q13263 835 aaKnown RBP10.27□□□□□ -0.77
LINC02549-201ENST00000445346 CCDC152Q4G0S7 254 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 PLA2G2CQ5R387 149 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 RSBN1LQ6PCB5 846 aaPredicted RBP10.27□□□□□ -0.77
LINC02549-201ENST00000445346 AGBL3Q8NEM8 1001 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 SEC31BQ9NQW1 1179 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 TAF1P21675 1872 aa10.27□□□□□ -0.77
LINC02549-201ENST00000445346 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 ZNF280AP59817 542 aaPredicted RBP10.26□□□□□ -0.77
LINC02549-201ENST00000445346 FKBP1BP68106 108 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC02549-201ENST00000445346 RALBP1Q15311 655 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 PKN2Q16513 984 aaKnown RBP10.26□□□□□ -0.77
LINC02549-201ENST00000445346 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
LINC02549-201ENST00000445346 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
LINC02549-201ENST00000445346 RNF223E7ERA6 249 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 TBC1D8O95759 1140 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 ATP2B4P23634 1241 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 NF2P35240 595 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 BRICD5Q6PL45 260 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 MYD88Q99836 296 aa10.25□□□□□ -0.77
LINC02549-201ENST00000445346 POLR2AP24928 1970 aaKnown RBP10.25□□□□□ -0.77
LINC02549-201ENST00000445346 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms