RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
RBM39-216ENST00000444878 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 KIF3AQ9Y496 699 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 PHF14O94880 888 aa16.11■□□□□ 0.17
RBM39-216ENST00000444878 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
RBM39-216ENST00000444878 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
RBM39-216ENST00000444878 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
RBM39-216ENST00000444878 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
RBM39-216ENST00000444878 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
RBM39-216ENST00000444878 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 EVCP57679 992 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
RBM39-216ENST00000444878 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
RBM39-216ENST00000444878 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 MBD4O95243 580 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 HSPA1LP34931 641 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
RBM39-216ENST00000444878 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
RBM39-216ENST00000444878 TRPC5Q9UL62 973 aaPredicted RBP16.1■□□□□ 0.17
RBM39-216ENST00000444878 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
RBM39-216ENST00000444878 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 PATL2C9JE40 543 aaKnown RBP16.09■□□□□ 0.17
RBM39-216ENST00000444878 ONECUT3O60422 494 aaPredicted RBP16.09■□□□□ 0.17
RBM39-216ENST00000444878 GYG1P46976 350 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
RBM39-216ENST00000444878 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 IQSEC3Q9UPP2 1182 aaPredicted RBP16.09■□□□□ 0.17
RBM39-216ENST00000444878 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 MYH15Q9Y2K3 1946 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 NPHP1O15259 732 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 RFC4P35249 363 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 ALX1Q15699 326 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 VPS37DQ86XT2 251 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 NAPBQ9H115 298 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 RBSNQ9H1K0 784 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 ZNF804BA4D1E1 1349 aa16.09■□□□□ 0.17
RBM39-216ENST00000444878 ANTXR2P58335 489 aa16.08■□□□□ 0.16
RBM39-216ENST00000444878 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
RBM39-216ENST00000444878 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
RBM39-216ENST00000444878 CCDC183Q5T5S1 534 aa16.08■□□□□ 0.16
RBM39-216ENST00000444878 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
RBM39-216ENST00000444878 IFNL3Q8IZI9 196 aa16.08■□□□□ 0.16
RBM39-216ENST00000444878 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
RBM39-216ENST00000444878 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
RBM39-216ENST00000444878 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 ZMYM6O95789 1325 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
RBM39-216ENST00000444878 GNAT2P19087 354 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
RBM39-216ENST00000444878 ELP1O95163 1332 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 SALL1Q9NSC2 1324 aa16.07■□□□□ 0.16
RBM39-216ENST00000444878 EP400Q96L91 3159 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 WTIPA6NIX2 430 aaPredicted RBP16.06■□□□□ 0.16
RBM39-216ENST00000444878 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 RESTQ13127 1097 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 FAM196AQ6ZSG2 479 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 NACAP1Q9BZK3 213 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
RBM39-216ENST00000444878 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
RBM39-216ENST00000444878 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
RBM39-216ENST00000444878 DENND2AQ9ULE3 1009 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 ANGEL1Q9UNK9 670 aaKnown RBP16.06■□□□□ 0.16
RBM39-216ENST00000444878 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
RBM39-216ENST00000444878 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 B4E1Z4 1266 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
RBM39-216ENST00000444878 CYP7A1P22680 504 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 FOSBP53539 338 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 MIGA1Q8NAN2 632 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 FAM84BQ96KN1 310 aaPredicted RBP16.05■□□□□ 0.16
RBM39-216ENST00000444878 CARMIL3Q8ND23 1372 aa16.05■□□□□ 0.16
RBM39-216ENST00000444878 TDO2P48775 406 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 CPLX1O14810 134 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 PRKAB2O43741 272 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
RBM39-216ENST00000444878 NEDD4P46934 1319 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
RBM39-216ENST00000444878 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms