RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FLOT1O75955 427 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 SYKP43405 635 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 KIF5AQ12840 1032 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 IFT88Q13099 833 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 TRIM22Q8IYM9 498 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC170Q8IYT3 715 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 DDX12PQ92771 950 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 KIF1BPQ96EK5 621 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 TULP2O00295 520 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 VIMP08670 466 aaKnown RBP5.8□□□□□ -1.48
SCN11A-202ENST00000444237 CLTAP09496 248 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 ZFXP17010 805 aaPredicted RBP5.8□□□□□ -1.48
SCN11A-202ENST00000444237 ATP2B2Q01814 1243 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 DRP2Q13474 957 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 SEPT2Q15019 361 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 NAIF1Q69YI7 327 aaPredicted RBP5.8□□□□□ -1.48
SCN11A-202ENST00000444237 NBPF10Q6P3W6 841 aaKnown RBP5.8□□□□□ -1.48
SCN11A-202ENST00000444237 APLFQ8IW19 511 aaPredicted RBP5.8□□□□□ -1.48
SCN11A-202ENST00000444237 GUCA1BQ9UMX6 200 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 RASSF2P50749 326 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 TAF11Q15544 211 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 HSP90AA5PQ58FG0 334 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 CFAP70Q5T0N1 1121 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 C8orf74Q6P047 294 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 PRAM1Q96QH2 718 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 KLC4Q9NSK0 619 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 CDC23Q9UJX2 597 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 USH1CQ9Y6N9 552 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 UHRF1BP1Q6BDS2 1440 aa5.8□□□□□ -1.48
SCN11A-202ENST00000444237 TMPOP42166 694 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 TRIM14Q14142 442 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PHLDB3Q6NSJ2 640 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 HMG20BQ9P0W2 317 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PPP2R2CQ9Y2T4 447 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 SESN3P58005 492 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 MTMR3Q13615 1198 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 CASP8Q14790 479 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 HOOK3Q86VS8 718 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PARP9Q8IXQ6 854 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ARHGAP24Q8N264 748 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 SMC6Q96SB8 1091 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 SELENOOQ9BVL4 669 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 CARD10Q9BWT7 1032 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 CABP2Q9NPB3 220 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC96Q2M329 555 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 MIER3Q7Z3K6 550 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ARHGAP18Q8N392 663 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 TANGO6Q9C0B7 1094 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 TSPYL4Q9UJ04 414 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 SAMM50Q9Y512 469 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 NPC1L1Q9UHC9 1359 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 CIB2O75838 187 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ATP5DP30049 168 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 HNRNPH1P31943 449 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 MMP14P50281 582 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 TMEM132AQ24JP5 1023 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 SWT1Q5T5J6 900 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ACBD5Q5T8D3 534 aaPredicted RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 EGFL6Q8IUX8 553 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 AMOTL1Q8IY63 956 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 IFT81Q8WYA0 676 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 P3H4Q92791 437 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PLEKHA4Q9H4M7 779 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PPANQ9NQ55 473 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ZBTB40Q9NUA8 1239 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 THEGQ9P2T0 379 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 FAF1Q9UNN5 650 aaPredicted RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 ANKRD65E5RJM6 399 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 STAMBPO95630 424 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PSMC4P43686 418 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 VPS36Q86VN1 386 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 HAUS1Q96CS2 278 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PYM1Q9BRP8 204 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 PHAXQ9H814 394 aaKnown RBP5.79□□□□□ -1.48
SCN11A-202ENST00000444237 RASAL2Q9UJF2 1139 aa5.79□□□□□ -1.48
SCN11A-202ENST00000444237 TTC19Q6DKK2 380 aaPredicted RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 TMTC1Q8IUR5 882 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 COG3Q96JB2 828 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 ST7Q9NRC1 585 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 SATB2Q9UPW6 733 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 EXOC6BQ9Y2D4 811 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 FGFR1OPO95684 399 aaKnown RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 AK2P54819 239 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC122Q5T0U0 273 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 CYP26C1Q6V0L0 522 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 PLEKHM2Q8IWE5 1019 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 DDX58O95786 925 aaKnown RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 IDEP14735 1019 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 PRKAR2BP31323 418 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 CTNNBL1Q8WYA6 563 aaPredicted RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 ABTB1Q969K4 478 aaPredicted RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 XPO4Q9C0E2 1151 aaKnown RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 TSPYL2Q9H2G4 693 aaPredicted RBP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN11A-202ENST00000444237 YEATS2Q9ULM3 1422 aa5.78□□□□□ -1.48
SCN11A-202ENST00000444237 AKR1B10O60218 316 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms