RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 ZNF408Q9H9D4 720 aa19.34■□□□□ 0.69
ACTB-206ENST00000443528 HMG20BQ9P0W2 317 aa19.34■□□□□ 0.69
ACTB-206ENST00000443528 DBNLQ9UJU6 430 aaKnown RBP19.34■□□□□ 0.69
ACTB-206ENST00000443528 MYH13Q9UKX3 1938 aa19.33■□□□□ 0.69
ACTB-206ENST00000443528 KLRG1Q96E93 195 aa19.33■□□□□ 0.68
ACTB-206ENST00000443528 CDCA5Q96FF9 252 aa19.33■□□□□ 0.68
ACTB-206ENST00000443528 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
ACTB-206ENST00000443528 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.68
ACTB-206ENST00000443528 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.68
ACTB-206ENST00000443528 CLRN2A0PK11 232 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 APBB1O00213 710 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 RAB11FIP3O75154 756 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 MCAMP43121 646 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 TEKT1Q969V4 418 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
ACTB-206ENST00000443528 MAST3O60307 1309 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 MYO1BO43795 1136 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 LDHBP07195 334 aaKnown RBP19.31■□□□□ 0.68
ACTB-206ENST00000443528 UQCRFS1P1P0C7P4 283 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 PRAMEF18Q5VWM3 479 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 APOBEC3FQ8IUX4 373 aaKnown RBP19.31■□□□□ 0.68
ACTB-206ENST00000443528 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
ACTB-206ENST00000443528 MKRN1Q9UHC7 482 aaKnown RBP19.31■□□□□ 0.68
ACTB-206ENST00000443528 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
ACTB-206ENST00000443528 TLL2Q9Y6L7 1015 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 CNTNAP1P78357 1384 aa19.31■□□□□ 0.68
ACTB-206ENST00000443528 RASSF10A6NK89 507 aa19.3■□□□□ 0.68
ACTB-206ENST00000443528 TTC39AQ5SRH9 613 aa19.3■□□□□ 0.68
ACTB-206ENST00000443528 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
ACTB-206ENST00000443528 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
ACTB-206ENST00000443528 AACSQ86V21 672 aa19.3■□□□□ 0.68
ACTB-206ENST00000443528 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
ACTB-206ENST00000443528 ZNF512BQ96KM6 892 aaPredicted RBP19.3■□□□□ 0.68
ACTB-206ENST00000443528 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
ACTB-206ENST00000443528 ZNF70Q9UC06 446 aaPredicted RBP19.3■□□□□ 0.68
ACTB-206ENST00000443528 ABT1Q9ULW3 272 aaKnown RBP19.3■□□□□ 0.68
ACTB-206ENST00000443528 DIXDC1Q155Q3 683 aa19.29■□□□□ 0.68
ACTB-206ENST00000443528 SPDYE2Q495Y8 402 aa19.29■□□□□ 0.68
ACTB-206ENST00000443528 SAPCD2Q86UD0 394 aa19.29■□□□□ 0.68
ACTB-206ENST00000443528 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
ACTB-206ENST00000443528 DEFB115Q30KQ5 88 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 TBC1D9Q6ZT07 1266 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
ACTB-206ENST00000443528 DEFB129Q9H1M3 183 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 DCTPP1Q9H773 170 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 VEZTQ9HBM0 779 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 GBA2Q9HCG7 927 aaPredicted RBP19.28■□□□□ 0.68
ACTB-206ENST00000443528 SNRKQ9NRH2 765 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
ACTB-206ENST00000443528 SPTY2D1Q68D10 685 aaPredicted RBP19.27■□□□□ 0.68
ACTB-206ENST00000443528 VEGFBP49765 207 aa19.26■□□□□ 0.67
ACTB-206ENST00000443528 ERICH6Q7L0X2 663 aa19.26■□□□□ 0.67
ACTB-206ENST00000443528 C2orf69Q8N8R5 385 aa19.26■□□□□ 0.67
ACTB-206ENST00000443528 JMYQ8N9B5 988 aa19.26■□□□□ 0.67
ACTB-206ENST00000443528 ZNF384Q8TF68 577 aa19.26■□□□□ 0.67
ACTB-206ENST00000443528 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
ACTB-206ENST00000443528 CYP2E1P05181 493 aaPredicted RBP19.25■□□□□ 0.67
ACTB-206ENST00000443528 ZAP70P43403 619 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 MECOMQ03112 1051 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 RASA3Q14644 834 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 DZIP1Q86YF9 867 aaKnown RBP19.25■□□□□ 0.67
ACTB-206ENST00000443528 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 LRRCC1Q9C099 1032 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 PPP2R3BQ9Y5P8 575 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 AKAP11Q9UKA4 1901 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 GAKO14976 1311 aa19.25■□□□□ 0.67
ACTB-206ENST00000443528 TCP10L2B9ZVM9 353 aa19.24■□□□□ 0.67
ACTB-206ENST00000443528 IFIT2P09913 472 aaKnown RBP19.24■□□□□ 0.67
ACTB-206ENST00000443528 CACNB3P54284 484 aa19.24■□□□□ 0.67
ACTB-206ENST00000443528 HUNKP57058 714 aa19.24■□□□□ 0.67
ACTB-206ENST00000443528 FAM163AQ96GL9 167 aaPredicted RBP19.24■□□□□ 0.67
ACTB-206ENST00000443528 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
ACTB-206ENST00000443528 TNFAIP1Q13829 316 aa19.23■□□□□ 0.67
ACTB-206ENST00000443528 CYP4F22Q6NT55 531 aa19.23■□□□□ 0.67
ACTB-206ENST00000443528 CDC42EP5Q6NZY7 148 aa19.23■□□□□ 0.67
ACTB-206ENST00000443528 MOB2Q70IA6 237 aa19.23■□□□□ 0.67
ACTB-206ENST00000443528 NSUN4Q96CB9 384 aaKnown RBP19.23■□□□□ 0.67
ACTB-206ENST00000443528 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
ACTB-206ENST00000443528 FKBP1BP68106 108 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 AAMPQ13685 434 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 NBPF12Q5TAG4 269 aaPredicted RBP19.22■□□□□ 0.67
ACTB-206ENST00000443528 TEPSINQ96N21 525 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
ACTB-206ENST00000443528 RAI14Q9P0K7 980 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 LRP2BPQ9P2M1 347 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 SSC5DA1L4H1 1573 aa19.22■□□□□ 0.67
ACTB-206ENST00000443528 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
ACTB-206ENST00000443528 NF2P35240 595 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 FKBP1CQ5VVH2 108 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 CDAN1Q8IWY9 1227 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 TMEM39BQ9GZU3 492 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 USP40Q9NVE5 1235 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 PAPPA2Q9BXP8 1791 aa19.21■□□□□ 0.67
ACTB-206ENST00000443528 MROH7-TTC4A0A0A0MT08 1334 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms