RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 PTPRCP08575 1304 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 SSC5DA1L4H1 1573 aa12.77□□□□□ -0.36
HDLBP-219ENST00000442714 E9PSI1 815 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 FGFR2P21802 821 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 CAVIN4Q5BKX8 364 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 OTUD7BQ6GQQ9 843 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
HDLBP-219ENST00000442714 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
HDLBP-219ENST00000442714 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-219ENST00000442714 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
HDLBP-219ENST00000442714 RFX5P48382 616 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-219ENST00000442714 APOBEC3HQ6NTF7 200 aaKnown RBP12.76□□□□□ -0.37
HDLBP-219ENST00000442714 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
HDLBP-219ENST00000442714 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
HDLBP-219ENST00000442714 PDE4DIPQ5VU43 2346 aa12.76□□□□□ -0.37
HDLBP-219ENST00000442714 CHAF1AQ13111 956 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-219ENST00000442714 CRHR2Q13324 411 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 OPTNQ96CV9 577 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 ZDHHC15Q96MV8 337 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
HDLBP-219ENST00000442714 MYH3P11055 1940 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-219ENST00000442714 KIF16BQ96L93 1317 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 EYA2O00167 538 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-219ENST00000442714 TNNI2P48788 182 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 ALDH1L2Q3SY69 923 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDLBP-219ENST00000442714 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 BRI3BPQ8WY22 251 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
HDLBP-219ENST00000442714 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 IFIT1P09914 478 aaKnown RBP12.73□□□□□ -0.37
HDLBP-219ENST00000442714 CACNB3P54284 484 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 CAP1Q01518 475 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 SP3Q02447 781 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 VGLL4Q14135 290 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
HDLBP-219ENST00000442714 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
HDLBP-219ENST00000442714 FAM83AQ86UY5 434 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 PTPN22Q9Y2R2 807 aa12.73□□□□□ -0.37
HDLBP-219ENST00000442714 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
HDLBP-219ENST00000442714 GTF2A2P52657 109 aa12.72□□□□□ -0.37
HDLBP-219ENST00000442714 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
HDLBP-219ENST00000442714 LPIN2Q92539 896 aa12.72□□□□□ -0.37
HDLBP-219ENST00000442714 PRPF38BQ5VTL8 546 aaKnown RBP12.71□□□□□ -0.37
HDLBP-219ENST00000442714 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
HDLBP-219ENST00000442714 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-219ENST00000442714 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
HDLBP-219ENST00000442714 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
HDLBP-219ENST00000442714 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
HDLBP-219ENST00000442714 CSADQ9Y600 493 aa12.71□□□□□ -0.37
HDLBP-219ENST00000442714 CCL15-CCL14A0A0B4J2E2 113 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 CIAO1O76071 339 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 CCL15Q16663 113 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 ZFYVE28Q9HCC9 887 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
HDLBP-219ENST00000442714 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 IRF6O14896 467 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 ZBTB22O15209 634 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 CETPP11597 493 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 SLC5A1P13866 664 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 FAM151AQ8WW52 585 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 HOOK2Q96ED9 719 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 CEP126Q9P2H0 1117 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
HDLBP-219ENST00000442714 MAST3O60307 1309 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 BTBD19C9JJ37 291 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 TLR2O60603 784 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-219ENST00000442714 TAF1CQ15572 869 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-219ENST00000442714 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 TMOD2Q9NZR1 351 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 HTTP42858 3142 aa12.68□□□□□ -0.38
HDLBP-219ENST00000442714 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-219ENST00000442714 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-219ENST00000442714 PPATQ06203 517 aa12.67□□□□□ -0.38
HDLBP-219ENST00000442714 SNAPC2Q13487 334 aa12.67□□□□□ -0.38
HDLBP-219ENST00000442714 ARHGEF6Q15052 776 aa12.67□□□□□ -0.38
HDLBP-219ENST00000442714 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms