RNA–Protein interactions for RNA: ENST00000441708.1

CTNNB1-208, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-208ENST00000441708 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.53
CTNNB1-208ENST00000441708 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 VAMP4O75379 141 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 FKBP1AP62942 108 aaKnown RBP11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 FOXO4P98177 505 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 OTUD7BQ6GQQ9 843 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
CTNNB1-208ENST00000441708 FKBP5Q13451 457 aaPredicted RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 LINS1Q8NG48 757 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 COL6A3P12111 3177 aa11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
CTNNB1-208ENST00000441708 FAM205AQ6ZU69 1335 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 PLIN1O60240 522 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 ARHGAP39Q9C0H5 1083 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
CTNNB1-208ENST00000441708 RANBP2P49792 3224 aaKnown RBP11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 CCL15-CCL14A0A0B4J2E2 113 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 IFIT5Q13325 482 aaKnown RBP11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 VGLL4Q14135 290 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 GRIK5Q16478 980 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 CCL15Q16663 113 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 MFSD14BQ5SR56 506 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 TMEM106CQ9BVX2 250 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
CTNNB1-208ENST00000441708 F6X3S4 739 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 GYG1P46976 350 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 LMBR1LQ6UX01 489 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
CTNNB1-208ENST00000441708 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 PTPRCP08575 1304 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 CRKP46108 304 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 SERPINA10Q9UK55 444 aa11.65□□□□□ -0.54
CTNNB1-208ENST00000441708 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 H0YGN5 161 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 GTF2A2P52657 109 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 CACNB3P54284 484 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 BEND3Q5T5X7 828 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 IQSEC3Q9UPP2 1182 aaPredicted RBP11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 CSADQ9Y600 493 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
CTNNB1-208ENST00000441708 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 BTBD19C9JJ37 291 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 CTGFP29279 349 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 LACTBP83111 547 aaPredicted RBP11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 FAM84BQ96KN1 310 aaPredicted RBP11.63□□□□□ -0.55
CTNNB1-208ENST00000441708 MYH1P12882 1939 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 MYH8P13535 1937 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 GRM8O00222 908 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 TLR2O60603 784 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 HIBADHP31937 336 aaKnown RBP11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 TNNI2P48788 182 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 MTFR1Q15390 333 aa11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
CTNNB1-208ENST00000441708 IRF6O14896 467 aa11.61□□□□□ -0.55
CTNNB1-208ENST00000441708 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms