RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 PSMA7O14818 248 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 TBCAO75347 108 aaKnown RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 WDHD1O75717 1129 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 SEC24BO95487 1268 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 CYLC1P35663 651 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 MAGEB6Q8N7X4 407 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 APPBP2Q92624 585 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 EYA3Q99504 573 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 ZKSCAN5Q9Y2L8 839 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 IDEP14735 1019 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 GBP2P32456 591 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 CKAP4Q07065 602 aaKnown RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 GCKRQ14397 625 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 TDRD12Q587J7 1177 aaKnown RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 PLEKHF1Q96S99 279 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 UBA5Q9GZZ9 404 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 SNX14Q9Y5W7 946 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 KDRP35968 1356 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 SH3TC1Q8TE82 1336 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 NEFHP12036 1026 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 SYT1P21579 422 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 GNA11P29992 359 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 STX8Q9UNK0 236 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 A0A1B0GUL7 405 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 BICDL2A1A5D9 508 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 USP37Q86T82 979 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 LUZP1Q86V48 1076 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 KBTBD3Q8NAB2 608 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 SSH3Q8TE77 659 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 TCEANC2Q96MN5 208 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 VAT1LQ9HCJ6 419 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 ALS2Q96Q42 1657 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 ELP1O95163 1332 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 USP8P40818 1118 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 NAPAP54920 295 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 NOLC1Q14978 699 aaKnown RBP eCLIP7.29□□□□□ -1.242e-6■■■□□ 15.5
CNOT1-202ENST00000441024 RAB11FIP4Q86YS3 637 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 ACSBG1Q96GR2 724 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 RBM17Q96I25 401 aaKnown RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 C16orf45Q96MC5 204 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-202ENST00000441024 FEZ1Q99689 392 aa7.29□□□□□ -1.24
CNOT1-202ENST00000441024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.29□□□□□ -1.249e-11■■□□□ 14.5
CNOT1-202ENST00000441024 MROH5Q6ZUA9 1318 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
CNOT1-202ENST00000441024 ATP5JP18859 108 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 ZNF622Q969S3 477 aaKnown RBP eCLIP7.28□□□□□ -1.246e-7■□□□□ 9.1
CNOT1-202ENST00000441024 TAOK3Q9H2K8 898 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 LGR6Q9HBX8 967 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 TRMT1Q9NXH9 659 aaKnown RBP7.28□□□□□ -1.24
CNOT1-202ENST00000441024 TULP4Q9NRJ4 1543 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 A2ML1A8K2U0 1454 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 HSPA4P34932 840 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 BMS1Q14692 1282 aaKnown RBP7.28□□□□□ -1.24
CNOT1-202ENST00000441024 SKIDA1Q1XH10 827 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 RILPL1Q5EBL4 403 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 KRI1Q8N9T8 703 aaKnown RBP7.28□□□□□ -1.24
CNOT1-202ENST00000441024 SUCLG2Q96I99 432 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 DSCC1Q9BVC3 393 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 PANK2Q9BZ23 570 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 FBXO3Q9UK99 471 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 CD163L1Q9NR16 1453 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 SKILP12757 684 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 ITGA6P23229 1130 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 FAM160A1Q05DH4 1040 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 HEATR3Q7Z4Q2 680 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 TTC6Q86TZ1 520 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 AOPEPQ8N6M6 819 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 SHTN1A0MZ66 631 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 DEXIO95424 95 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 PRIM1P49642 420 aaKnown RBP7.28□□□□□ -1.24
CNOT1-202ENST00000441024 XAGE2Q96GT9 111 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 DNAJC25Q9H1X3 360 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 ZNF521Q96K83 1311 aa7.28□□□□□ -1.24
CNOT1-202ENST00000441024 FAM193AP78312 1265 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 CCDC186Q7Z3E2 898 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 LPIN2Q92539 896 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 ORAI2Q96SN7 254 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.27□□□□□ -1.25
CNOT1-202ENST00000441024 GLT8D2Q9H1C3 349 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 CDC42BPGQ6DT37 1551 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 MBD4O95243 580 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 GNG11P61952 73 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 KRT83P78385 493 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 FMNL3Q8IVF7 1028 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 IQUBQ8NA54 791 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 DBNDD2Q9BQY9 259 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 FAM107BQ9H098 131 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 MCM9Q9NXL9 1143 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 SHANK3Q9BYB0 1731 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 MST1RQ04912 1400 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 UBAP1LF5GYI3 381 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 KRT79Q5XKE5 535 aa7.27□□□□□ -1.25
CNOT1-202ENST00000441024 OTUD7AQ8TE49 926 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms