RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TTC39AQ5SRH9 613 aa22.16■■□□□ 1.14
CPSF4-205ENST00000440514 SULF1Q8IWU6 871 aa22.16■■□□□ 1.14
CPSF4-205ENST00000440514 MAST3O60307 1309 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 RAB11FIP3O75154 756 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 MCAMP43121 646 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 SPATA5Q8NB90 893 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 PRMT6Q96LA8 375 aaPredicted RBP22.15■■□□□ 1.14
CPSF4-205ENST00000440514 ZNF408Q9H9D4 720 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 SERPINA10Q9UK55 444 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 AKAP11Q9UKA4 1901 aa22.15■■□□□ 1.14
CPSF4-205ENST00000440514 CLRN2A0PK11 232 aa22.14■■□□□ 1.13
CPSF4-205ENST00000440514 UQCRFS1P1P0C7P4 283 aa22.14■■□□□ 1.13
CPSF4-205ENST00000440514 CCDC158Q5M9N0 1113 aa22.14■■□□□ 1.13
CPSF4-205ENST00000440514 SUGT1Q9Y2Z0 365 aa22.14■■□□□ 1.13
CPSF4-205ENST00000440514 TMEM88BA6NKF7 163 aa22.13■■□□□ 1.13
CPSF4-205ENST00000440514 LDHBP07195 334 aaKnown RBP22.13■■□□□ 1.13
CPSF4-205ENST00000440514 IRX6P78412 446 aaPredicted RBP22.13■■□□□ 1.13
CPSF4-205ENST00000440514 CLASRPQ8N2M8 674 aaKnown RBP22.13■■□□□ 1.13
CPSF4-205ENST00000440514 TEKT1Q969V4 418 aa22.13■■□□□ 1.13
CPSF4-205ENST00000440514 SNRKQ9NRH2 765 aa22.13■■□□□ 1.13
CPSF4-205ENST00000440514 CREBZFQ9NS37 354 aa22.13■■□□□ 1.13
CPSF4-205ENST00000440514 ABCF2Q9UG63 623 aa22.13■■□□□ 1.13
CPSF4-205ENST00000440514 MAST2Q6P0Q8 1798 aa22.12■■□□□ 1.13
CPSF4-205ENST00000440514 CELF2O95319 508 aaKnown RBP22.12■■□□□ 1.13
CPSF4-205ENST00000440514 DIXDC1Q155Q3 683 aa22.12■■□□□ 1.13
CPSF4-205ENST00000440514 CST9Q5W186 159 aa22.12■■□□□ 1.13
CPSF4-205ENST00000440514 CDCA5Q96FF9 252 aa22.12■■□□□ 1.13
CPSF4-205ENST00000440514 SMARCA5O60264 1052 aaPredicted RBP22.11■■□□□ 1.13
CPSF4-205ENST00000440514 HDLBPQ00341 1268 aaKnown RBP22.11■■□□□ 1.13
CPSF4-205ENST00000440514 TBC1D9Q6ZT07 1266 aa22.11■■□□□ 1.13
CPSF4-205ENST00000440514 APOBEC3FQ8IUX4 373 aaKnown RBP22.11■■□□□ 1.13
CPSF4-205ENST00000440514 LRRCC1Q9C099 1032 aa22.11■■□□□ 1.13
CPSF4-205ENST00000440514 DCTPP1Q9H773 170 aa22.11■■□□□ 1.13
CPSF4-205ENST00000440514 TDRD3Q9H7E2 651 aaKnown RBP22.11■■□□□ 1.13
CPSF4-205ENST00000440514 MYO1BO43795 1136 aa22.1■■□□□ 1.13
CPSF4-205ENST00000440514 ZGPATQ8N5A5 531 aaKnown RBP22.1■■□□□ 1.13
CPSF4-205ENST00000440514 VEZTQ9HBM0 779 aa22.1■■□□□ 1.13
CPSF4-205ENST00000440514 IFIT2P09913 472 aaKnown RBP22.09■■□□□ 1.13
CPSF4-205ENST00000440514 SPDYE2Q495Y8 402 aa22.09■■□□□ 1.13
CPSF4-205ENST00000440514 PRAMEF18Q5VWM3 479 aa22.09■■□□□ 1.13
CPSF4-205ENST00000440514 ZNF512BQ96KM6 892 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-205ENST00000440514 ZDHHC15Q96MV8 337 aa22.09■■□□□ 1.13
CPSF4-205ENST00000440514 ZNF70Q9UC06 446 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-205ENST00000440514 DAGLAQ9Y4D2 1042 aa22.09■■□□□ 1.13
CPSF4-205ENST00000440514 MYH2Q9UKX2 1941 aa22.09■■□□□ 1.13
CPSF4-205ENST00000440514 ZAP70P43403 619 aa22.08■■□□□ 1.13
CPSF4-205ENST00000440514 HHIPL2Q6UWX4 724 aa22.08■■□□□ 1.13
CPSF4-205ENST00000440514 DZIP1Q86YF9 867 aaKnown RBP22.08■■□□□ 1.13
CPSF4-205ENST00000440514 ABT1Q9ULW3 272 aaKnown RBP22.08■■□□□ 1.13
CPSF4-205ENST00000440514 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
CPSF4-205ENST00000440514 MYO5AQ9Y4I1 1855 aaKnown RBP22.08■■□□□ 1.13
CPSF4-205ENST00000440514 SPTY2D1Q68D10 685 aaPredicted RBP22.07■■□□□ 1.12
CPSF4-205ENST00000440514 MRIQ9BWK5 157 aa22.07■■□□□ 1.12
CPSF4-205ENST00000440514 MKRN1Q9UHC7 482 aaKnown RBP22.07■■□□□ 1.12
CPSF4-205ENST00000440514 CYP2E1P05181 493 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-205ENST00000440514 CACNB3P54284 484 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 MECOMQ03112 1051 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 AAMPQ13685 434 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 APOBEC3HQ6NTF7 200 aaKnown RBP22.06■■□□□ 1.12
CPSF4-205ENST00000440514 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 ZNF384Q8TF68 577 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 DOCK2Q92608 1830 aa22.06■■□□□ 1.12
CPSF4-205ENST00000440514 PAPPA2Q9BXP8 1791 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 CNTNAP1P78357 1384 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 DEFB129Q9H1M3 183 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 PIH1D3Q9NQM4 214 aaKnown RBP22.05■■□□□ 1.12
CPSF4-205ENST00000440514 RAI14Q9P0K7 980 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 GAKO14976 1311 aa22.05■■□□□ 1.12
CPSF4-205ENST00000440514 SSC5DA1L4H1 1573 aa22.04■■□□□ 1.12
CPSF4-205ENST00000440514 TCP10L2B9ZVM9 353 aa22.04■■□□□ 1.12
CPSF4-205ENST00000440514 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
CPSF4-205ENST00000440514 GBA2Q9HCG7 927 aaPredicted RBP22.04■■□□□ 1.12
CPSF4-205ENST00000440514 LRP2BPQ9P2M1 347 aa22.04■■□□□ 1.12
CPSF4-205ENST00000440514 NSUN4Q96CB9 384 aaKnown RBP22.03■■□□□ 1.12
CPSF4-205ENST00000440514 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
CPSF4-205ENST00000440514 MROH7-TTC4A0A0A0MT08 1334 aa22.03■■□□□ 1.12
CPSF4-205ENST00000440514 RASSF10A6NK89 507 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 RASA3Q14644 834 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 CDC42EP5Q6NZY7 148 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 SAPCD2Q86UD0 394 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 ANTXR1Q9H6X2 564 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 TMOD2Q9NZR1 351 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 PPP2R3BQ9Y5P8 575 aa22.02■■□□□ 1.12
CPSF4-205ENST00000440514 CEP350Q5VT06 3117 aa22.01■■□□□ 1.11
CPSF4-205ENST00000440514 TNFAIP1Q13829 316 aa22.01■■□□□ 1.11
CPSF4-205ENST00000440514 MOB2Q70IA6 237 aa22.01■■□□□ 1.11
CPSF4-205ENST00000440514 CDAN1Q8IWY9 1227 aa22.01■■□□□ 1.11
CPSF4-205ENST00000440514 BTDP43251 543 aa22■■□□□ 1.11
CPSF4-205ENST00000440514 HUNKP57058 714 aa22■■□□□ 1.11
CPSF4-205ENST00000440514 PAXIP1Q6ZW49 1069 aaPredicted RBP22■■□□□ 1.11
CPSF4-205ENST00000440514 SLF2Q8IX21 1173 aa22■■□□□ 1.11
CPSF4-205ENST00000440514 C2orf69Q8N8R5 385 aa22■■□□□ 1.11
CPSF4-205ENST00000440514 DNAJC2Q99543 621 aaKnown RBP22■■□□□ 1.11
CPSF4-205ENST00000440514 NF2P35240 595 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 GSTO1P78417 241 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 DEFB115Q30KQ5 88 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms