RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 BRCA1P38398 1863 aaKnown RBP13.69□□□□□ -0.22
SMPD4P2-201ENST00000440167 LAMB1P07942 1786 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 TTC14Q96N46 770 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 SCN9AQ15858 1988 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 IL1R1P14778 569 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 AK2P54819 239 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 HAND2P61296 217 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 MECOMQ03112 1051 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 TSGA10IPQ3SY00 556 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 CYP46A1Q9Y6A2 500 aa13.68□□□□□ -0.22
SMPD4P2-201ENST00000440167 ADAMTSL1Q8N6G6 1762 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 ZBTB22O15209 634 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 PRKAB2O43741 272 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 FGAP02671 866 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 APPP05067 770 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 DYNLL1P63167 89 aaKnown RBP13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 GRIK5Q16478 980 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 RUFY3Q7L099 469 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 PDRG1Q9NUG6 133 aa13.67□□□□□ -0.22
SMPD4P2-201ENST00000440167 MAGEB6P1A0A0J9YX57 407 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 DPEP1P16444 411 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 PSMA5P28066 241 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 ZC3H12CQ9C0D7 883 aaKnown RBP13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 NAV1Q8NEY1 1877 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
SMPD4P2-201ENST00000440167 E7EWF7 191 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 MCM2P49736 904 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 KRT32Q14532 448 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
SMPD4P2-201ENST00000440167 GSG1L2A8MUP6 293 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 C21orf2O43822 256 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 POLD1P28340 1107 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 DZIP1Q86YF9 867 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 PSME4Q14997 1843 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 KCNA3P22001 575 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 SDR42E1Q8WUS8 393 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 EYA3Q99504 573 aa13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 RIOK1Q9BRS2 568 aaKnown RBP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 AATFQ9NY61 560 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMPD4P2-201ENST00000440167 G3V3G9 751 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 ZNF213O14771 459 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 LARGE1O95461 756 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 GNAT2P19087 354 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 GTF2IP78347 998 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 DIXDC1Q155Q3 683 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 NAPBQ9H115 298 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
SMPD4P2-201ENST00000440167 TDO2P48775 406 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 LRRC2Q9BYS8 371 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 MYH1P12882 1939 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 FER1L6Q2WGJ9 1857 aa13.62□□□□□ -0.23
SMPD4P2-201ENST00000440167 DDIT3P35638 169 aa13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 ALX1Q15699 326 aa13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
SMPD4P2-201ENST00000440167 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms