RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RFX7Q2KHR2 1363 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 B4E1Z4 1266 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 RXRAP19793 462 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 MAGEB6P1A0A0J9YX57 407 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 PLSCR1O15162 318 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-205ENST00000439958 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 GGA1Q9UJY5 639 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 DDIT3P35638 169 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 ZKSCAN3Q9BRR0 538 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-205ENST00000439958 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 CUL4AQ13619 759 aa17.81■□□□□ 0.44
CPSF7-205ENST00000439958 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
CPSF7-205ENST00000439958 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
CPSF7-205ENST00000439958 PRC1O43663 620 aa17.8■□□□□ 0.44
CPSF7-205ENST00000439958 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-205ENST00000439958 PDGFDQ9GZP0 370 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-205ENST00000439958 XDHP47989 1333 aa17.8■□□□□ 0.44
CPSF7-205ENST00000439958 SBF2Q86WG5 1849 aa17.8■□□□□ 0.44
CPSF7-205ENST00000439958 JAK2O60674 1132 aa17.8■□□□□ 0.44
CPSF7-205ENST00000439958 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
CPSF7-205ENST00000439958 PRDM1O75626 825 aa17.79■□□□□ 0.44
CPSF7-205ENST00000439958 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
CPSF7-205ENST00000439958 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-205ENST00000439958 CYP2D7A0A087X1C5 515 aa17.79■□□□□ 0.44
CPSF7-205ENST00000439958 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
CPSF7-205ENST00000439958 SYT1P21579 422 aa17.79■□□□□ 0.44
CPSF7-205ENST00000439958 GSE1Q14687 1217 aa17.79■□□□□ 0.44
CPSF7-205ENST00000439958 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
CPSF7-205ENST00000439958 FOXP2O15409 715 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 ZNF804AQ7Z570 1209 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 H3BQV1 296 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 GUCY1B3Q02153 619 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 TBC1D10CQ8IV04 446 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 ZDHHC9Q9Y397 364 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
CPSF7-205ENST00000439958 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-205ENST00000439958 STX6O43752 255 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 MECOMQ03112 1051 aa17.78■□□□□ 0.44
CPSF7-205ENST00000439958 CPLX1O14810 134 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 FIBPO43427 364 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 MCM5P33992 734 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 DOK7Q18PE1 504 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 KCNB2Q92953 911 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 TCRBV5S4A2TA0A5A2 114 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 CHRNA5P30532 468 aa17.77■□□□□ 0.44
CPSF7-205ENST00000439958 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.43
CPSF7-205ENST00000439958 SMIM22K7EJ46 135 aa17.77■□□□□ 0.43
CPSF7-205ENST00000439958 LDHBP07195 334 aaKnown RBP17.77■□□□□ 0.43
CPSF7-205ENST00000439958 MICU3Q86XE3 530 aa17.77■□□□□ 0.43
CPSF7-205ENST00000439958 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.43
CPSF7-205ENST00000439958 MTMR7Q9Y216 660 aa17.77■□□□□ 0.43
CPSF7-205ENST00000439958 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
CPSF7-205ENST00000439958 FAM173BQ6P4H8 233 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 EPB41L4AQ9HCS5 686 aaPredicted RBP17.76■□□□□ 0.43
CPSF7-205ENST00000439958 MFSD6Q6ZSS7 791 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 C2CD5Q86YS7 1000 aa17.76■□□□□ 0.43
CPSF7-205ENST00000439958 ZC3H12CQ9C0D7 883 aaKnown RBP17.76■□□□□ 0.43
CPSF7-205ENST00000439958 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
CPSF7-205ENST00000439958 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
CPSF7-205ENST00000439958 BAG6P46379 1132 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 RGL2O15211 777 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 BBOX1O75936 387 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 GTF2IP78347 998 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-205ENST00000439958 LEMD3Q9Y2U8 911 aa17.75■□□□□ 0.43
CPSF7-205ENST00000439958 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
CPSF7-205ENST00000439958 USP5P45974 858 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 ST3GAL1Q11201 340 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 BRIP1Q9BX63 1249 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 POLLQ9UGP5 575 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 SCRN1Q12765 414 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
CPSF7-205ENST00000439958 CEBPZQ03701 1054 aaKnown RBP17.73■□□□□ 0.43
CPSF7-205ENST00000439958 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 FBXO41Q8TF61 875 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 TAF1LQ8IZX4 1826 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 RREB1Q92766 1687 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 SCN7AQ01118 1682 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 MPNDQ8N594 471 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 NEDD4P46934 1319 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms