RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 SEC24BO95487 1268 aa9.04□□□□□ -0.96
UBR3-205ENST00000439681 ZSCAN25Q6NSZ9 544 aa9.04□□□□□ -0.96
UBR3-205ENST00000439681 ADGRA1Q86SQ6 560 aa9.04□□□□□ -0.96
UBR3-205ENST00000439681 SEC62Q99442 399 aaKnown RBP9.04□□□□□ -0.96
UBR3-205ENST00000439681 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
UBR3-205ENST00000439681 AKAP11Q9UKA4 1901 aa9.04□□□□□ -0.96
UBR3-205ENST00000439681 CYP7A1P22680 504 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 TNIP1Q15025 636 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 LRRFIP1Q32MZ4 808 aaKnown RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 CWC27Q6UX04 472 aaKnown RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 BACH2Q9BYV9 841 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 DIAPH3Q9NSV4 1193 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 ZNF541Q9H0D2 1346 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 M0R2C6 588 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 SGSM2O43147 1006 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 NAA16Q6N069 864 aaPredicted RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 APPBP2Q92624 585 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 FAM163AQ96GL9 167 aaPredicted RBP9.03□□□□□ -0.96
UBR3-205ENST00000439681 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 HELLSQ9NRZ9 838 aa9.03□□□□□ -0.96
UBR3-205ENST00000439681 F8W031 263 aaPredicted RBP9.02□□□□□ -0.97
UBR3-205ENST00000439681 MCMDC2Q4G0Z9 681 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.97
UBR3-205ENST00000439681 ZNF589Q86UQ0 364 aaPredicted RBP9.02□□□□□ -0.97
UBR3-205ENST00000439681 DZIP1Q86YF9 867 aaKnown RBP9.02□□□□□ -0.97
UBR3-205ENST00000439681 KIAA0825Q8IV33 1275 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 AGBL3Q8NEM8 1001 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
UBR3-205ENST00000439681 UTRNP46939 3433 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 MAST3O60307 1309 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 SCNN1DP51172 638 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 GSTO1P78417 241 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 CASC1Q6TDU7 716 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.97
UBR3-205ENST00000439681 MYO3BQ8WXR4 1341 aa9.01□□□□□ -0.97
UBR3-205ENST00000439681 HDLBPQ00341 1268 aaKnown RBP9.01□□□□□ -0.97
UBR3-205ENST00000439681 MIGA1Q8NAN2 632 aa9.01□□□□□ -0.97
UBR3-205ENST00000439681 STRBPQ96SI9 672 aaKnown RBP9.01□□□□□ -0.97
UBR3-205ENST00000439681 RIOK1Q9BRS2 568 aaKnown RBP9.01□□□□□ -0.97
UBR3-205ENST00000439681 GAKO14976 1311 aa9.01□□□□□ -0.97
UBR3-205ENST00000439681 CHD4Q14839 1912 aa9.01□□□□□ -0.97
UBR3-205ENST00000439681 GPR75-ASB3A0A0A6YYF3 556 aa9□□□□□ -0.97
UBR3-205ENST00000439681 SHTN1A0MZ66 631 aa9□□□□□ -0.97
UBR3-205ENST00000439681 LDHCP07864 332 aa9□□□□□ -0.97
UBR3-205ENST00000439681 RPS12P25398 132 aaKnown RBP9□□□□□ -0.97
UBR3-205ENST00000439681 CRKP46108 304 aa9□□□□□ -0.97
UBR3-205ENST00000439681 GMPSP49915 693 aaPredicted RBP9□□□□□ -0.97
UBR3-205ENST00000439681 PPP4CP60510 307 aa9□□□□□ -0.97
UBR3-205ENST00000439681 DYNLL1P63167 89 aaKnown RBP9□□□□□ -0.97
UBR3-205ENST00000439681 APOBEC3HQ6NTF7 200 aaKnown RBP9□□□□□ -0.97
UBR3-205ENST00000439681 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
UBR3-205ENST00000439681 DPF2Q92785 391 aa9□□□□□ -0.97
UBR3-205ENST00000439681 DAGLAQ9Y4D2 1042 aa9□□□□□ -0.97
UBR3-205ENST00000439681 PCDHAC2Q9Y5I4 1007 aa9□□□□□ -0.97
UBR3-205ENST00000439681 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
UBR3-205ENST00000439681 MROH7-TTC4A0A0A0MT08 1334 aa9□□□□□ -0.97
UBR3-205ENST00000439681 SCN9AQ15858 1988 aa9□□□□□ -0.97
UBR3-205ENST00000439681 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
UBR3-205ENST00000439681 FOXP2O15409 715 aa9□□□□□ -0.97
UBR3-205ENST00000439681 GPAA1O43292 621 aa9□□□□□ -0.97
UBR3-205ENST00000439681 MBD4O95243 580 aa9□□□□□ -0.97
UBR3-205ENST00000439681 USP17L8P0C7I0 530 aa9□□□□□ -0.97
UBR3-205ENST00000439681 ZNF280AP59817 542 aaPredicted RBP9□□□□□ -0.97
UBR3-205ENST00000439681 PTH1RQ03431 593 aa9□□□□□ -0.97
UBR3-205ENST00000439681 VPS53Q5VIR6 699 aa9□□□□□ -0.97
UBR3-205ENST00000439681 SLF2Q8IX21 1173 aa9□□□□□ -0.97
UBR3-205ENST00000439681 GPC2Q8N158 579 aa9□□□□□ -0.97
UBR3-205ENST00000439681 LCORLQ8N3X6 602 aa9□□□□□ -0.97
UBR3-205ENST00000439681 ZDHHC15Q96MV8 337 aa9□□□□□ -0.97
UBR3-205ENST00000439681 LSG1Q9H089 658 aaKnown RBP9□□□□□ -0.97
UBR3-205ENST00000439681 ARMT1Q9H993 441 aa9□□□□□ -0.97
UBR3-205ENST00000439681 SERPINA10Q9UK55 444 aa9□□□□□ -0.97
UBR3-205ENST00000439681 RAD50Q92878 1312 aa9□□□□□ -0.97
UBR3-205ENST00000439681 DDNO94850 711 aaPredicted RBP8.99□□□□□ -0.97
UBR3-205ENST00000439681 RHBDL3P58872 404 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 TEKT1Q969V4 418 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 AATFQ9NY61 560 aaKnown RBP eCLIP8.99□□□□□ -0.97
UBR3-205ENST00000439681 CCDC171Q6TFL3 1326 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 PRKAB2O43741 272 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 BTDP43251 543 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 CFAP100Q494V2 611 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 MTMR14Q8NCE2 650 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 SH3RF3Q8TEJ3 882 aaPredicted RBP8.99□□□□□ -0.97
UBR3-205ENST00000439681 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 ZBED3Q96IU2 234 aaPredicted RBP8.99□□□□□ -0.97
UBR3-205ENST00000439681 USP26Q9BXU7 913 aa8.99□□□□□ -0.97
UBR3-205ENST00000439681 CNOT7Q9UIV1 285 aaKnown RBP8.99□□□□□ -0.97
UBR3-205ENST00000439681 BAG3O95817 575 aa8.98□□□□□ -0.97
UBR3-205ENST00000439681 HSPD1P10809 573 aaKnown RBP8.98□□□□□ -0.97
UBR3-205ENST00000439681 MMP14P50281 582 aa8.98□□□□□ -0.97
UBR3-205ENST00000439681 MFAP1P55081 439 aaKnown RBP8.98□□□□□ -0.97
UBR3-205ENST00000439681 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
UBR3-205ENST00000439681 MAP4K1Q92918 833 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms