RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
NCKIPSD-206ENST00000439518 SIL1Q9H173 461 aa25.34■■□□□ 1.65
NCKIPSD-206ENST00000439518 IPO8O15397 1037 aaKnown RBP25.33■■□□□ 1.65
NCKIPSD-206ENST00000439518 TM4SF4P48230 202 aa25.33■■□□□ 1.65
NCKIPSD-206ENST00000439518 PPP1R12BO60237 982 aaPredicted RBP25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 BCAR3O75815 825 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 TNFAIP1Q13829 316 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 MRIQ9BWK5 157 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 COPRSQ9NQ92 184 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 CEP126Q9P2H0 1117 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 SUGT1Q9Y2Z0 365 aa25.32■■□□□ 1.64
NCKIPSD-206ENST00000439518 UNCXA6NJT0 531 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 GNAI3P08754 354 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 TRIM27P14373 513 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 IL15P40933 162 aaPredicted RBP25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 ATP2B3Q16720 1220 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 SPRYD7Q5W111 196 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 MCOLN1Q9GZU1 580 aa25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 PA2G4Q9UQ80 394 aaKnown RBP25.31■■□□□ 1.64
NCKIPSD-206ENST00000439518 MKRN3Q13064 507 aaKnown RBP25.3■■□□□ 1.64
NCKIPSD-206ENST00000439518 ATF7IPQ6VMQ6 1270 aa25.3■■□□□ 1.64
NCKIPSD-206ENST00000439518 TEPSINQ96N21 525 aa25.3■■□□□ 1.64
NCKIPSD-206ENST00000439518 TNNQ9UQP3 1299 aa25.3■■□□□ 1.64
NCKIPSD-206ENST00000439518 HNRNPUQ00839 825 aaKnown RBP eCLIP25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 MTX1Q13505 466 aa25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 TEKT1Q969V4 418 aa25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 SLC10A4Q96EP9 437 aa25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 CLMNQ96JQ2 1002 aa25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 ZDHHC15Q96MV8 337 aa25.29■■□□□ 1.64
NCKIPSD-206ENST00000439518 USP2O75604 605 aaPredicted RBP25.28■■□□□ 1.64
NCKIPSD-206ENST00000439518 DGKZQ13574 1117 aa25.28■■□□□ 1.64
NCKIPSD-206ENST00000439518 WDR66Q8TBY9 1149 aa25.28■■□□□ 1.64
NCKIPSD-206ENST00000439518 FRAT1Q92837 279 aaPredicted RBP25.28■■□□□ 1.64
NCKIPSD-206ENST00000439518 TCP10L2B9ZVM9 353 aa25.27■■□□□ 1.64
NCKIPSD-206ENST00000439518 SREBF2Q12772 1141 aa25.27■■□□□ 1.64
NCKIPSD-206ENST00000439518 CDAN1Q8IWY9 1227 aa25.27■■□□□ 1.64
NCKIPSD-206ENST00000439518 MAST3O60307 1309 aa25.27■■□□□ 1.64
NCKIPSD-206ENST00000439518 APOBEC3HQ6NTF7 200 aaKnown RBP25.26■■□□□ 1.63
NCKIPSD-206ENST00000439518 TMEM39BQ9GZU3 492 aa25.26■■□□□ 1.63
NCKIPSD-206ENST00000439518 ZBTB22O15209 634 aa25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 SRGAP3O43295 1099 aa25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 ZBTB48P10074 688 aaPredicted RBP25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 IREB2P48200 963 aaKnown RBP25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 TNNI2P48788 182 aa25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 HHIPL2Q6UWX4 724 aa25.25■■□□□ 1.63
NCKIPSD-206ENST00000439518 TBC1D8O95759 1140 aa25.24■■□□□ 1.63
NCKIPSD-206ENST00000439518 FKBP1CQ5VVH2 108 aa25.24■■□□□ 1.63
NCKIPSD-206ENST00000439518 CLUAP1Q96AJ1 413 aa25.24■■□□□ 1.63
NCKIPSD-206ENST00000439518 WNK4Q96J92 1243 aa25.24■■□□□ 1.63
NCKIPSD-206ENST00000439518 GNL3LQ9NVN8 582 aaKnown RBP25.24■■□□□ 1.63
NCKIPSD-206ENST00000439518 MANSC4A6NHS7 340 aaPredicted RBP25.23■■□□□ 1.63
NCKIPSD-206ENST00000439518 PHKA1P46020 1223 aa25.23■■□□□ 1.63
NCKIPSD-206ENST00000439518 CACNB3P54284 484 aa25.23■■□□□ 1.63
NCKIPSD-206ENST00000439518 ANKRD13AQ8IZ07 590 aa25.23■■□□□ 1.63
NCKIPSD-206ENST00000439518 CFHR5Q9BXR6 569 aa25.23■■□□□ 1.63
NCKIPSD-206ENST00000439518 SEMA3EO15041 775 aa25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 GNAI2P04899 355 aa25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 ADORA1P30542 326 aa25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 INHBEP58166 350 aa25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 NOM1Q5C9Z4 860 aaKnown RBP25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 MYH13Q9UKX3 1938 aa25.22■■□□□ 1.63
NCKIPSD-206ENST00000439518 CCDC85CA6NKD9 419 aa25.21■■□□□ 1.63
NCKIPSD-206ENST00000439518 ZKSCAN2Q63HK3 967 aa25.21■■□□□ 1.63
NCKIPSD-206ENST00000439518 FAM83AQ86UY5 434 aa25.21■■□□□ 1.63
NCKIPSD-206ENST00000439518 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.21■■□□□ 1.63
NCKIPSD-206ENST00000439518 SALL1Q9NSC2 1324 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 PRDX5P30044 214 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 GJA5P36382 358 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 TIMM10P62072 90 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 CCDC102BQ68D86 513 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 TMEM57Q8N5G2 664 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 TMOD2Q9NZR1 351 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 DENND2AQ9ULE3 1009 aa25.2■■□□□ 1.62
NCKIPSD-206ENST00000439518 TFCP2Q12800 502 aa25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 CTU1Q7Z7A3 348 aaKnown RBP25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 IFNL1Q8IU54 200 aa25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 ZNF296Q8WUU4 475 aaPredicted RBP25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 DAGLAQ9Y4D2 1042 aa25.19■■□□□ 1.62
NCKIPSD-206ENST00000439518 LAMB1P07942 1786 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 GPR25O00155 361 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 ALDH1A1P00352 501 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 LDHBP07195 334 aaKnown RBP25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 DIXDC1Q155Q3 683 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 R3HDMLQ9H3Y0 253 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 AKAP2Q9Y2D5 859 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 OTOFQ9HC10 1997 aa25.18■■□□□ 1.62
NCKIPSD-206ENST00000439518 PNMA6EA0A0J9YXQ4 647 aa25.17■■□□□ 1.62
NCKIPSD-206ENST00000439518 A0A1B0GUL7 405 aa25.17■■□□□ 1.62
NCKIPSD-206ENST00000439518 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.17■■□□□ 1.62
NCKIPSD-206ENST00000439518 ELP3Q9H9T3 547 aa25.17■■□□□ 1.62
NCKIPSD-206ENST00000439518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.17■■□□□ 1.62
NCKIPSD-206ENST00000439518 IGF2BP3O00425 579 aaKnown RBP eCLIP25.16■■□□□ 1.62
NCKIPSD-206ENST00000439518 MAP3K9P80192 1104 aa25.16■■□□□ 1.62
NCKIPSD-206ENST00000439518 RASGRF1Q13972 1273 aa25.16■■□□□ 1.62
NCKIPSD-206ENST00000439518 PDS5AQ29RF7 1337 aaKnown RBP25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 VGLL4Q14135 290 aa25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 CDC42EP5Q6NZY7 148 aa25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 OPTNQ96CV9 577 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms