RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KCND1Q9NSA2 647 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 MYL5Q02045 173 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 VSTM4Q8IW00 320 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 GPR161Q8N6U8 529 aaKnown RBP15.4■□□□□ 0.06
ACTN1-204ENST00000438964 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 NKX2-3Q8TAU0 364 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 UBXN6Q9BZV1 441 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 AGLP35573 1532 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
ACTN1-204ENST00000438964 BMP6P22004 513 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 LTKP29376 864 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
ACTN1-204ENST00000438964 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-204ENST00000438964 ANO1Q5XXA6 986 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 PACS2Q86VP3 889 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 FBXO18Q8NFZ0 1043 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 ALDH8A1Q9H2A2 487 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-204ENST00000438964 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 LEKR1Q6ZMV7 388 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 CCDC82Q8N4S0 544 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 XAGE3Q8WTP9 111 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 MYL10Q9BUA6 226 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 ABCB6Q9NP58 842 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
ACTN1-204ENST00000438964 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 GTF2A1P52655 376 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 STX17P56962 302 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 FMR1Q06787 632 aaKnown RBP eCLIP15.38■□□□□ 0.054e-6■■■□□ 17.6
ACTN1-204ENST00000438964 MUM1L1Q5H9M0 696 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 SHC4Q6S5L8 630 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 GOLGA1Q92805 767 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 SAMSN1Q9NSI8 373 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 CASP1P29466 404 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 ACTN2P35609 894 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 NOP2P46087 812 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 GRIN1Q05586 938 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 GPATCH11Q8N954 259 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 KIFC2Q96AC6 838 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 ZNF594Q96JF6 807 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 LLPHQ9BRT6 129 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 ATG3Q9NT62 314 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 LOC102724159A0A0B4J2E5 919 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 PWP2Q15269 919 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 WASHC4Q2M389 1173 aa15.38■□□□□ 0.05
ACTN1-204ENST00000438964 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 RIN2Q8WYP3 895 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
ACTN1-204ENST00000438964 M0R2C6 588 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 ZMYND10O75800 440 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 ATP5JP18859 108 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 PTPN12Q05209 780 aaKnown RBP15.37■□□□□ 0.05
ACTN1-204ENST00000438964 METTL16Q86W50 562 aaKnown RBP15.37■□□□□ 0.05
ACTN1-204ENST00000438964 TC2NQ8N9U0 490 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 GOLGA5Q8TBA6 731 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 KCNG4Q8TDN1 519 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 PSME1Q06323 249 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 ANKZF1Q9H8Y5 726 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
ACTN1-204ENST00000438964 CHD2O14647 1828 aaKnown RBP15.37■□□□□ 0.05
ACTN1-204ENST00000438964 ARHGAP6O43182 974 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 TEX33O43247 280 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 TXLNAP40222 546 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 FAM193AP78312 1265 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 PPARDQ03181 441 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 ZNF569Q5MCW4 686 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 CNNM3Q8NE01 707 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 TSPYL1Q9H0U9 437 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 CWC15Q9P013 229 aaKnown RBP15.36■□□□□ 0.05
ACTN1-204ENST00000438964 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 VSNL1P62760 191 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 SRRTQ9BXP5 876 aaKnown RBP15.36■□□□□ 0.05
ACTN1-204ENST00000438964 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
ACTN1-204ENST00000438964 A0A1W2PQ27 194 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 A0A1W2PQ64 194 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 KIF4BQ2VIQ3 1234 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 PI16Q6UXB8 463 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 INCENPQ9NQS7 918 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 NRXN3Q9Y4C0 1643 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 MAST3O60307 1309 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 SPATA31D1Q6ZQQ2 1576 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 PRC1O43663 620 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 GCKRQ14397 625 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-204ENST00000438964 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms