RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 ARMT1Q9H993 441 aa20.52■□□□□ 0.87
TVP23C-204ENST00000438826 PRC1O43663 620 aa20.51■□□□□ 0.87
TVP23C-204ENST00000438826 GRAPQ13588 217 aa20.51■□□□□ 0.87
TVP23C-204ENST00000438826 PRR5LQ6MZQ0 368 aa20.51■□□□□ 0.87
TVP23C-204ENST00000438826 IFNL3Q8IZI9 196 aa20.51■□□□□ 0.87
TVP23C-204ENST00000438826 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
TVP23C-204ENST00000438826 GRAPLQ8TC17 118 aaPredicted RBP20.51■□□□□ 0.87
TVP23C-204ENST00000438826 TNRC6CQ9HCJ0 1690 aaKnown RBP20.5■□□□□ 0.87
TVP23C-204ENST00000438826 JAK2O60674 1132 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 PDIA3P30101 505 aaKnown RBP20.5■□□□□ 0.87
TVP23C-204ENST00000438826 USP48Q86UV5 1035 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 SMARCC2Q8TAQ2 1214 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 NAPBQ9H115 298 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 RAI14Q9P0K7 980 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-204ENST00000438826 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
TVP23C-204ENST00000438826 EPB41L4AQ9HCS5 686 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-204ENST00000438826 GSG1L2A8MUP6 293 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 CYP7A1P22680 504 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 KLRK1P26718 216 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 HIBADHP31937 336 aaKnown RBP20.49■□□□□ 0.87
TVP23C-204ENST00000438826 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 TBC1D10CQ8IV04 446 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 LCORLQ8N3X6 602 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
TVP23C-204ENST00000438826 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
TVP23C-204ENST00000438826 PDS5AQ29RF7 1337 aaKnown RBP20.49■□□□□ 0.87
TVP23C-204ENST00000438826 SERPINB2P05120 415 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 ANTXR2P58335 489 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 ST5P78524 1137 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 HMGN5P82970 282 aaKnown RBP20.48■□□□□ 0.87
TVP23C-204ENST00000438826 PROM2Q8N271 834 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 NSUN7Q8NE18 718 aaKnown RBP20.48■□□□□ 0.87
TVP23C-204ENST00000438826 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 EP400Q96L91 3159 aa20.48■□□□□ 0.87
TVP23C-204ENST00000438826 CCT2P78371 535 aaKnown RBP20.47■□□□□ 0.87
TVP23C-204ENST00000438826 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
TVP23C-204ENST00000438826 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
TVP23C-204ENST00000438826 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
TVP23C-204ENST00000438826 RPGRQ92834 1020 aaKnown RBP20.47■□□□□ 0.87
TVP23C-204ENST00000438826 TFCP2L1Q9NZI6 479 aa20.47■□□□□ 0.87
TVP23C-204ENST00000438826 ZBTB22O15209 634 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 MRE11P49959 708 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 DNM1Q05193 864 aaKnown RBP20.46■□□□□ 0.87
TVP23C-204ENST00000438826 ZSCAN23Q3MJ62 389 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 CRY2Q49AN0 593 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 DDX11Q96FC9 970 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
TVP23C-204ENST00000438826 ANKIB1Q9P2G1 1089 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 NSFL1CQ9UNZ2 370 aaKnown RBP20.46■□□□□ 0.87
TVP23C-204ENST00000438826 KIF3AQ9Y496 699 aa20.46■□□□□ 0.87
TVP23C-204ENST00000438826 MAGEB6P1A0A0J9YX57 407 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 PRKAB2O43741 272 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 TDO2P48775 406 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 ZNF445P59923 1031 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 ADGRA1Q86SQ6 560 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 NCOA5Q9HCD5 579 aaKnown RBP20.45■□□□□ 0.86
TVP23C-204ENST00000438826 LEMD3Q9Y2U8 911 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 BRPF3Q9ULD4 1205 aa20.45■□□□□ 0.86
TVP23C-204ENST00000438826 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 KLF18A0A0U1RQI7 1052 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 H3BQV1 296 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 PLSCR1O15162 318 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 DHX16O60231 1041 aaKnown RBP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 GAS2L3Q86XJ1 694 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 ANGEL1Q9UNK9 670 aaKnown RBP20.44■□□□□ 0.86
TVP23C-204ENST00000438826 TCHHQ07283 1943 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 XDHP47989 1333 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
TVP23C-204ENST00000438826 B4E1Z4 1266 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 FIBPO43427 364 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 CYB5R4Q7L1T6 521 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 FERMT3Q86UX7 667 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 TMEM63CQ9P1W3 806 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 NEDD4P46934 1319 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 GOLGA8BA8MQT2 603 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 UBE2HP62256 183 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 AKNAD1Q5T1N1 836 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
TVP23C-204ENST00000438826 RBM17Q96I25 401 aaKnown RBP20.43■□□□□ 0.86
TVP23C-204ENST00000438826 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
TVP23C-204ENST00000438826 POLRMTO00411 1230 aaKnown RBP20.42■□□□□ 0.86
TVP23C-204ENST00000438826 KRT85P78386 507 aa20.42■□□□□ 0.86
TVP23C-204ENST00000438826 CTDSPL2Q05D32 466 aa20.42■□□□□ 0.86
TVP23C-204ENST00000438826 DDR1Q08345 913 aa20.42■□□□□ 0.86
TVP23C-204ENST00000438826 SYAP1Q96A49 352 aaPredicted RBP20.42■□□□□ 0.86
TVP23C-204ENST00000438826 KRT23Q9C075 422 aa20.42■□□□□ 0.86
TVP23C-204ENST00000438826 HPS5Q9UPZ3 1129 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms