RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 OSBP2Q969R2 916 aa16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 WASHC4Q2M389 1173 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 PIH1D3Q9NQM4 214 aaKnown RBP16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 GYS1P13807 737 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 KRT85P78386 507 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 TTC6Q86TZ1 520 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
PTCHD3-201ENST00000438700 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 RXRBP28702 533 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 BCAMP50895 628 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 GIMAP6Q6P9H5 292 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 SCRN1Q12765 414 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 SASS6Q6UVJ0 657 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
PTCHD3-201ENST00000438700 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 DYNC1I1O14576 645 aa16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 RPS8P62241 208 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 APPBP2Q92624 585 aa16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 FOSBP53539 338 aa16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-201ENST00000438700 E7EWF7 191 aa16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 APBA3O96018 575 aa16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 SLC9C2Q5TAH2 1124 aa16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 TM4SF1P30408 202 aa16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 ADD2P35612 726 aa16.32■□□□□ 0.2
PTCHD3-201ENST00000438700 DOCK2Q92608 1830 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 MCM5P33992 734 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 HAND2P61296 217 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 PRR5LQ6MZQ0 368 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 TTC12Q9H892 705 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 USP25Q9UHP3 1055 aa16.31■□□□□ 0.2
PTCHD3-201ENST00000438700 H3BQV1 296 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 UBE4AQ14139 1066 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 MAP7D2Q96T17 732 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 PLSCR1O15162 318 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 GYG1P46976 350 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
PTCHD3-201ENST00000438700 LETM1O95202 739 aaPredicted RBP16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 PDE6AP16499 860 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 GPAA1O43292 621 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 LIG1P18858 919 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 CAMK4Q16566 473 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 ZNF804BA4D1E1 1349 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 ZNF532Q9HCE3 1301 aa16.29■□□□□ 0.2
PTCHD3-201ENST00000438700 FOXP2O15409 715 aa16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 SERPINB2P05120 415 aa16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 EXOSC10Q01780 885 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 PFKFB2O60825 505 aa16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-201ENST00000438700 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 GOLGA6L4A6NEF3 574 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 CTDNEP1O95476 244 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 DDR1Q08345 913 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 LEO1Q8WVC0 666 aaPredicted RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 SCAND2PQ9GZW5 306 aaPredicted RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 ELP1O95163 1332 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 TCRBV5S4A2TA0A5A2 114 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 KLRK1P26718 216 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 ST5P78524 1137 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 MAP3K12Q12852 859 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 FUCA2Q9BTY2 467 aa16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
PTCHD3-201ENST00000438700 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms