RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 SIK1P57059 783 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 GPR162Q16538 588 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
LINC00271-203ENST00000438618 KANK3Q6NY19 840 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
LINC00271-203ENST00000438618 IGSF1Q8N6C5 1336 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 ATG3Q9NT62 314 aa9.69□□□□□ -0.86
LINC00271-203ENST00000438618 NCAPD2Q15021 1401 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 SKIP12755 728 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 GSK3AP49840 483 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 CABP4P57796 275 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 LBRQ14739 615 aaKnown RBP9.68□□□□□ -0.86
LINC00271-203ENST00000438618 EML3Q32P44 896 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 ACDQ96AP0 544 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 DOT1LQ8TEK3 1739 aa9.68□□□□□ -0.86
LINC00271-203ENST00000438618 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
LINC00271-203ENST00000438618 SMIM5Q71RC9 77 aa9.67□□□□□ -0.86
LINC00271-203ENST00000438618 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
LINC00271-203ENST00000438618 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
LINC00271-203ENST00000438618 NIFKQ9BYG3 293 aaKnown RBP9.67□□□□□ -0.86
LINC00271-203ENST00000438618 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
LINC00271-203ENST00000438618 SCNN1DP51172 638 aa9.66□□□□□ -0.86
LINC00271-203ENST00000438618 SMTNP53814 917 aa9.66□□□□□ -0.86
LINC00271-203ENST00000438618 ITPK1Q13572 414 aa9.66□□□□□ -0.86
LINC00271-203ENST00000438618 BEND7Q8N7W2 519 aaPredicted RBP9.66□□□□□ -0.86
LINC00271-203ENST00000438618 LINC00116Q8NCU8 138 aa9.66□□□□□ -0.86
LINC00271-203ENST00000438618 PAPPAQ13219 1627 aa9.66□□□□□ -0.86
LINC00271-203ENST00000438618 LY75O60449 1722 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 PIK3CDO00329 1044 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
LINC00271-203ENST00000438618 HMOX1P09601 288 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 BMP4P12644 408 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 TRAPPC3LQ5T215 181 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
LINC00271-203ENST00000438618 CNTNAP5Q8WYK1 1306 aa9.64□□□□□ -0.87
LINC00271-203ENST00000438618 PTCD1O75127 700 aaKnown RBP9.64□□□□□ -0.87
LINC00271-203ENST00000438618 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
LINC00271-203ENST00000438618 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
LINC00271-203ENST00000438618 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
LINC00271-203ENST00000438618 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
LINC00271-203ENST00000438618 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 ANKRD26Q9UPS8 1709 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
LINC00271-203ENST00000438618 THBS1P07996 1170 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 SSFA2P28290 1259 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 ARSJQ5FYB0 599 aaPredicted RBP9.63□□□□□ -0.87
LINC00271-203ENST00000438618 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 KLRG1Q96E93 195 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
LINC00271-203ENST00000438618 CD2APQ9Y5K6 639 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
LINC00271-203ENST00000438618 ITGB4P16144 1822 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 PLEKHG2Q9H7P9 1386 aa9.63□□□□□ -0.87
LINC00271-203ENST00000438618 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 BACH1O14867 736 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 OIP5O43482 229 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 FGFR3P22607 806 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 FLIIQ13045 1269 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 C1orf216Q8TAB5 229 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 CRISPLD1Q9H336 500 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 RRAGCQ9HB90 399 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 GJA3Q9Y6H8 435 aa9.62□□□□□ -0.87
LINC00271-203ENST00000438618 A6NJY4 79 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 LZTS3O60299 673 aaPredicted RBP9.61□□□□□ -0.87
LINC00271-203ENST00000438618 GRIN3BO60391 1043 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 RFC4P35249 363 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
LINC00271-203ENST00000438618 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 GALNT6Q8NCL4 622 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 KDRP35968 1356 aa9.61□□□□□ -0.87
LINC00271-203ENST00000438618 QSER1Q2KHR3 1735 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 TOGARAM1Q9Y4F4 1720 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
LINC00271-203ENST00000438618 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 AMPD1P23109 780 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 GTF2IP78347 998 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 NCOA4Q13772 614 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 CFAP53Q96M91 514 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 ALG2Q9H553 416 aa9.6□□□□□ -0.87
LINC00271-203ENST00000438618 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
LINC00271-203ENST00000438618 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
LINC00271-203ENST00000438618 C5P01031 1676 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 CDK2AP1O14519 115 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 BNIP3LO60238 219 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 YBX3P16989 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC00271-203ENST00000438618 C1QTNF8P60827 252 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 DEPDC4Q8N2C3 294 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 GOLGA6L1Q8N7Z2 621 aa9.59□□□□□ -0.87
LINC00271-203ENST00000438618 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms