RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 HSP90AB1P08238 724 aaKnown RBP6.97□□□□□ -1.29
CCDC93-203ENST00000437999 PPP2R1AP30153 589 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 C1orf141Q5JVX7 400 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 DHX37Q8IY37 1157 aaKnown RBP6.97□□□□□ -1.29
CCDC93-203ENST00000437999 RNF217Q8TC41 542 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 SMARCC1Q92922 1105 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-203ENST00000437999 DCAF5Q96JK2 942 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 CNTNAP3BQ96NU0 1288 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 ASAP1Q9ULH1 1129 aa6.97□□□□□ -1.29
CCDC93-203ENST00000437999 KDM6AO15550 1401 aaPredicted RBP6.96□□□□□ -1.3
CCDC93-203ENST00000437999 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.3
CCDC93-203ENST00000437999 DKK1O94907 266 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 CABP4P57796 275 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 KCNA1Q09470 495 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 DDX10Q13206 875 aaKnown RBP6.96□□□□□ -1.3
CCDC93-203ENST00000437999 PTK7Q13308 1070 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 CRTC2Q53ET0 693 aaPredicted RBP6.96□□□□□ -1.3
CCDC93-203ENST00000437999 CCDC102BQ68D86 513 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 SIX5Q8N196 739 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 CCDC155Q8N6L0 562 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 TPCN2Q8NHX9 752 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 NANOS1Q8WY41 292 aaKnown RBP6.96□□□□□ -1.3
CCDC93-203ENST00000437999 CFAP53Q96M91 514 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 ATG3Q9NT62 314 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 TAF1LQ8IZX4 1826 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 TUBGCP6Q96RT7 1819 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 C5P01031 1676 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 PNPLA7Q6ZV29 1317 aa6.96□□□□□ -1.3
CCDC93-203ENST00000437999 LOC102724428A0A0B4J2F2 783 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L15C9J2P7 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L10C9JJH3 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L13C9JLJ4 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L12C9JPN9 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L11C9JVI0 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L21D6R901 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L18D6R9N7 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L22D6RA61 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L17D6RBQ6 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L19D6RCP7 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L20D6RJB6 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 BACH1O14867 736 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 BRD1O95696 1058 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 SIK1P57059 783 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 CENPCQ03188 943 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 USP17L24Q0WX57 530 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 MTHFSDQ2M296 383 aaKnown RBP6.95□□□□□ -1.3
CCDC93-203ENST00000437999 AKAP4Q5JQC9 854 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 PBXIP1Q96AQ6 731 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 ZNF594Q96JF6 807 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-203ENST00000437999 SLC4A9Q96Q91 983 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-203ENST00000437999 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 PPP1R1BQ9UD71 204 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-203ENST00000437999 QSER1Q2KHR3 1735 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 SCN11AQ9UI33 1791 aa6.95□□□□□ -1.3
CCDC93-203ENST00000437999 VIRMAQ69YN4 1812 aaKnown RBP6.94□□□□□ -1.3
CCDC93-203ENST00000437999 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
CCDC93-203ENST00000437999 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
CCDC93-203ENST00000437999 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.94□□□□□ -1.3
CCDC93-203ENST00000437999 COL25A1Q9BXS0 654 aaPredicted RBP6.94□□□□□ -1.3
CCDC93-203ENST00000437999 LGR6Q9HBX8 967 aa6.94□□□□□ -1.3
CCDC93-203ENST00000437999 ZNF358Q9NW07 568 aa6.94□□□□□ -1.3
CCDC93-203ENST00000437999 NUDCQ9Y266 331 aa6.94□□□□□ -1.3
CCDC93-203ENST00000437999 C4BP0C0L5 1744 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 M0R2N6 131 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 RNMTO43148 476 aaKnown RBP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 ATG7O95352 703 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 U2AF1L5P0DN76 240 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 PRKAR2BP31323 418 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 SMTNP53814 917 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 U2AF1Q01081 240 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 KRT76Q01546 638 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 ITPK1Q13572 414 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 TLR1Q15399 786 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 CCDC27Q2M243 656 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 SMIM5Q71RC9 77 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 LYSMD3Q7Z3D4 306 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 AMIGO3Q86WK7 504 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 COL23A1Q86Y22 540 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 VWA5B2Q8N398 1253 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 ADAMTS8Q9UP79 889 aa6.93□□□□□ -1.3
CCDC93-203ENST00000437999 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
CCDC93-203ENST00000437999 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
CCDC93-203ENST00000437999 SEC13P55735 322 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 DPYDQ12882 1025 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
CCDC93-203ENST00000437999 MTFR1Q15390 333 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 GAS2L2Q8NHY3 880 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 PHACTR3Q96KR7 559 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-203ENST00000437999 SLC52A2Q9HAB3 445 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms