RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 MROH5Q6ZUA9 1318 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 PDE6BP35913 854 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 PDE1AP54750 535 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 TIMM10P62072 90 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 GRAPQ13588 217 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 METTL24Q5JXM2 366 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 AACSQ86V21 672 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 HELBQ8NG08 1087 aaPredicted RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 GRAPLQ8TC17 118 aaPredicted RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 RBM17Q96I25 401 aaKnown RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 CCDC8Q9H0W5 538 aaPredicted RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 TLR7Q9NYK1 1049 aaKnown RBP8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
LSM3P3-201ENST00000436601 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 LRP5O75197 1615 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 PDE8BO95263 885 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 IFIT2P09913 472 aaKnown RBP8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 USP17L8P0C7I0 530 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 NPR1P16066 1061 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 MX1P20591 662 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 FGFR2P21802 821 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 GCGRP47871 477 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 CHRNDQ07001 517 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 C2CD5Q86YS7 1000 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 DBNLQ9UJU6 430 aaKnown RBP8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 NRXN2Q9P2S2 1712 aa8.62□□□□□ -1.03
LSM3P3-201ENST00000436601 A0A1B0GUL7 405 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 SNAP23O00161 211 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 HOXA2O43364 376 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 TAF5LO75529 589 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 BBOX1O75936 387 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 GSPT1P15170 499 aaKnown RBP8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 CHRNA5P30532 468 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 ABL2P42684 1182 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 TTC22Q5TAA0 569 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 MASTLQ96GX5 879 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 ECHDC1Q9NTX5 307 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 AKAP2Q9Y2D5 859 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 C10orf71Q711Q0 1435 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 LAMB2P55268 1798 aa8.61□□□□□ -1.03
LSM3P3-201ENST00000436601 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 H0YIN7 160 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 POLD1P28340 1107 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 ADORA1P30542 326 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 PUM3Q15397 648 aaKnown RBP8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 ATP2B3Q16720 1220 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 NEUROD6Q96NK8 337 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 NDUFB9Q9Y6M9 179 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 ZNF609O15014 1411 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 CASZ1Q86V15 1759 aa8.6□□□□□ -1.03
LSM3P3-201ENST00000436601 AOX1Q06278 1338 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 SMAPO00193 183 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 FDX1P10109 184 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 DPEP1P16444 411 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 ATP5JP18859 108 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 KCNA3P22001 575 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 ALDH1B1P30837 517 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 GPSM2P81274 684 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 BMP2KLQ5H9B9 411 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 SP8Q8IXZ3 490 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 LPIN2Q92539 896 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 ZNF622Q969S3 477 aaKnown RBP eCLIP8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 XAGE2Q96GT9 111 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 ANKRD2Q9GZV1 360 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 ATP6V0A2Q9Y487 856 aa8.59□□□□□ -1.03
LSM3P3-201ENST00000436601 A0A0G2JLW4 131 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 SDSP20132 328 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 UBE4AQ14139 1066 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 OLFM4Q6UX06 510 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 TMC4Q7Z404 712 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 GLMNQ92990 594 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 KCNK17Q96T54 332 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
LSM3P3-201ENST00000436601 IRS2Q9Y4H2 1338 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 ERC2O15083 957 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 MAP4K4O95819 1239 aaPredicted RBP8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 IFIT1P09914 478 aaKnown RBP8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 SLC5A1P13866 664 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 KLRK1P26718 216 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 TGFB2P61812 414 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms