RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
HMGN1-207ENST00000436324 FZD1Q9UP38 647 aa22.7■■□□□ 1.22
HMGN1-207ENST00000436324 THSD7BQ9C0I4 1608 aa22.7■■□□□ 1.22
HMGN1-207ENST00000436324 SLC10A3P09131 477 aa22.69■■□□□ 1.22
HMGN1-207ENST00000436324 KIF23Q02241 960 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-207ENST00000436324 G3BP1Q13283 466 aaKnown RBP eCLIP22.69■■□□□ 1.22
HMGN1-207ENST00000436324 TNS4Q8IZW8 715 aa22.69■■□□□ 1.22
HMGN1-207ENST00000436324 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-207ENST00000436324 PAPPA2Q9BXP8 1791 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 SPDYE2Q495Y8 402 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 ARMC9Q7Z3E5 817 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 RASAL3Q86YV0 1011 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 WDR66Q8TBY9 1149 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 TEKT1Q969V4 418 aa22.68■■□□□ 1.22
HMGN1-207ENST00000436324 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.68■■□□□ 1.22
HMGN1-207ENST00000436324 A0A1B0GUL7 405 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 ZBTB7BO15156 539 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-207ENST00000436324 RASA3Q14644 834 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 CCDC102BQ68D86 513 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 NEUROD6Q96NK8 337 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 ANGEL1Q9UNK9 670 aaKnown RBP22.67■■□□□ 1.22
HMGN1-207ENST00000436324 AKAP2Q9Y2D5 859 aa22.67■■□□□ 1.22
HMGN1-207ENST00000436324 COL1A1P02452 1464 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-207ENST00000436324 ATP8B2P98198 1209 aa22.66■■□□□ 1.22
HMGN1-207ENST00000436324 HDLBPQ00341 1268 aaKnown RBP22.66■■□□□ 1.22
HMGN1-207ENST00000436324 NBPF12Q5TAG4 269 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-207ENST00000436324 XAGE2Q96GT9 111 aa22.66■■□□□ 1.22
HMGN1-207ENST00000436324 PPP2R3BQ9Y5P8 575 aa22.66■■□□□ 1.22
HMGN1-207ENST00000436324 PCNTO95613 3336 aa22.66■■□□□ 1.22
HMGN1-207ENST00000436324 DENND2AQ9ULE3 1009 aa22.65■■□□□ 1.22
HMGN1-207ENST00000436324 SUGT1Q9Y2Z0 365 aa22.65■■□□□ 1.22
HMGN1-207ENST00000436324 MAST3O60307 1309 aa22.64■■□□□ 1.22
HMGN1-207ENST00000436324 CACNB3P54284 484 aa22.64■■□□□ 1.21
HMGN1-207ENST00000436324 MKRN3Q13064 507 aaKnown RBP22.64■■□□□ 1.21
HMGN1-207ENST00000436324 POLA2Q14181 598 aa22.64■■□□□ 1.21
HMGN1-207ENST00000436324 SUPT20HL1Q3ZLR7 823 aa22.64■■□□□ 1.21
HMGN1-207ENST00000436324 ARAP2Q8WZ64 1704 aa22.64■■□□□ 1.21
HMGN1-207ENST00000436324 PRDX5P30044 214 aa22.63■■□□□ 1.21
HMGN1-207ENST00000436324 OS9Q13438 667 aaPredicted RBP22.63■■□□□ 1.21
HMGN1-207ENST00000436324 TNFAIP1Q13829 316 aa22.63■■□□□ 1.21
HMGN1-207ENST00000436324 ZDHHC15Q96MV8 337 aa22.63■■□□□ 1.21
HMGN1-207ENST00000436324 RCAN3Q9UKA8 241 aa22.63■■□□□ 1.21
HMGN1-207ENST00000436324 LDHBP07195 334 aaKnown RBP22.62■■□□□ 1.21
HMGN1-207ENST00000436324 GORABQ5T7V8 394 aa22.62■■□□□ 1.21
HMGN1-207ENST00000436324 APOBEC3HQ6NTF7 200 aaKnown RBP22.62■■□□□ 1.21
HMGN1-207ENST00000436324 SSH3Q8TE77 659 aa22.62■■□□□ 1.21
HMGN1-207ENST00000436324 CSRNP1Q96S65 589 aa22.62■■□□□ 1.21
HMGN1-207ENST00000436324 MRIQ9BWK5 157 aa22.62■■□□□ 1.21
HMGN1-207ENST00000436324 TMEM39BQ9GZU3 492 aa22.62■■□□□ 1.21
HMGN1-207ENST00000436324 SSC5DA1L4H1 1573 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 SEMA3EO15041 775 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 CA12O43570 354 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 PPP1R12BO60237 982 aaPredicted RBP22.61■■□□□ 1.21
HMGN1-207ENST00000436324 SURF6O75683 361 aaKnown RBP22.61■■□□□ 1.21
HMGN1-207ENST00000436324 TNNI2P48788 182 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 RASGRF1Q13972 1273 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 MVPQ14764 893 aaKnown RBP22.61■■□□□ 1.21
HMGN1-207ENST00000436324 DIXDC1Q155Q3 683 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 HHIPL2Q6UWX4 724 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 CDAN1Q8IWY9 1227 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 TMOD2Q9NZR1 351 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 ECM29Q5VYK3 1845 aa22.61■■□□□ 1.21
HMGN1-207ENST00000436324 MS4A1P11836 297 aa22.6■■□□□ 1.21
HMGN1-207ENST00000436324 LDLRAD1Q5T700 205 aa22.6■■□□□ 1.21
HMGN1-207ENST00000436324 TRPA1O75762 1119 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 CAPN15O75808 1086 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 SLC10A4Q96EP9 437 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 CLMNQ96JQ2 1002 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 ABCF2Q9UG63 623 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 DAGLAQ9Y4D2 1042 aa22.59■■□□□ 1.21
HMGN1-207ENST00000436324 USP2O75604 605 aaPredicted RBP22.58■■□□□ 1.21
HMGN1-207ENST00000436324 CEP85Q6P2H3 762 aa22.58■■□□□ 1.21
HMGN1-207ENST00000436324 TEPSINQ96N21 525 aa22.58■■□□□ 1.21
HMGN1-207ENST00000436324 RNF186Q9NXI6 227 aa22.58■■□□□ 1.21
HMGN1-207ENST00000436324 SALL1Q9NSC2 1324 aa22.57■■□□□ 1.2
HMGN1-207ENST00000436324 MYH13Q9UKX3 1938 aa22.57■■□□□ 1.2
HMGN1-207ENST00000436324 IREB2P48200 963 aaKnown RBP22.57■■□□□ 1.2
HMGN1-207ENST00000436324 MAP3K11Q16584 847 aa22.57■■□□□ 1.2
HMGN1-207ENST00000436324 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
HMGN1-207ENST00000436324 PI16Q6UXB8 463 aa22.56■■□□□ 1.2
HMGN1-207ENST00000436324 TNNI3KQ59H18 835 aa22.55■■□□□ 1.2
HMGN1-207ENST00000436324 CDC42EP5Q6NZY7 148 aa22.55■■□□□ 1.2
HMGN1-207ENST00000436324 DZIP1Q86YF9 867 aaKnown RBP22.55■■□□□ 1.2
HMGN1-207ENST00000436324 HMG20BQ9P0W2 317 aa22.55■■□□□ 1.2
HMGN1-207ENST00000436324 FPGT-TNNI3KV9GXZ4 949 aa22.55■■□□□ 1.2
HMGN1-207ENST00000436324 SPRYD7Q5W111 196 aa22.54■■□□□ 1.2
HMGN1-207ENST00000436324 REM2Q8IYK8 340 aaPredicted RBP22.54■■□□□ 1.2
HMGN1-207ENST00000436324 USP40Q9NVE5 1235 aa22.54■■□□□ 1.2
HMGN1-207ENST00000436324 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
HMGN1-207ENST00000436324 ZBTB22O15209 634 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 TCP10Q12799 353 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 SPTY2D1Q68D10 685 aaPredicted RBP22.53■■□□□ 1.2
HMGN1-207ENST00000436324 TBC1D9Q6ZT07 1266 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 SPATA5Q8NB90 893 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 DBNDD2Q9BQY9 259 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
HMGN1-207ENST00000436324 SAGE1Q9NXZ1 904 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms