RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 LRMPQ12912 555 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 TMOD2Q9NZR1 351 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 ZNF202O95125 648 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 CCDC50Q8IVM0 306 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 IFT74Q96LB3 600 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 CPSF2Q9P2I0 782 aaKnown RBP25.29■■□□□ 1.64
TOP2B-204ENST00000435706 SLF2Q8IX21 1173 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 STIM2Q9P246 746 aa25.29■■□□□ 1.64
TOP2B-204ENST00000435706 BRD3Q15059 726 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CWF19L2Q2TBE0 894 aaKnown RBP25.28■■□□□ 1.64
TOP2B-204ENST00000435706 UTP14CQ5TAP6 766 aaKnown RBP25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CALM1P0DP23 149 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CALM2P0DP24 149 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CALM3P0DP25 149 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 MLKLQ8NB16 471 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 FERMT2Q96AC1 680 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 TMEM110-MUSTN1A8MSY1 372 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 BAG3O95817 575 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 FBXO31Q5XUX0 539 aaPredicted RBP25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CCDC174Q6PII3 467 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 TMTC1Q8IUR5 882 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 XPO4Q9C0E2 1151 aaKnown RBP25.28■■□□□ 1.64
TOP2B-204ENST00000435706 AMOTL2Q9Y2J4 779 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 ATP2A1O14983 1001 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CCDC25Q86WR0 208 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 CDC5LQ99459 802 aaKnown RBP25.28■■□□□ 1.64
TOP2B-204ENST00000435706 SWAP70Q9UH65 585 aa25.28■■□□□ 1.64
TOP2B-204ENST00000435706 LDHCP07864 332 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 MAP3K9P80192 1104 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 MTX1Q13505 466 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 CCDC26Q8TAB7 109 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 HELLSQ9NRZ9 838 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 SYNRGQ9UMZ2 1314 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 PKP1Q13835 747 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 RILPL1Q5EBL4 403 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 KLHL34Q8N239 644 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 PUS7Q96PZ0 661 aaKnown RBP25.27■■□□□ 1.64
TOP2B-204ENST00000435706 BUB1BO60566 1050 aaPredicted RBP25.27■■□□□ 1.64
TOP2B-204ENST00000435706 ATP11AP98196 1134 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 IFT20Q8IY31 132 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 CABP5Q9NP86 173 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 ZFYVE9O95405 1425 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 PPFIA1Q13136 1202 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 DAAM2Q86T65 1068 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 PPFIBP2Q8ND30 876 aa25.27■■□□□ 1.64
TOP2B-204ENST00000435706 NPC1L1Q9UHC9 1359 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 TBC1D8BQ0IIM8 1120 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 INTS8Q75QN2 995 aaKnown RBP25.26■■□□□ 1.63
TOP2B-204ENST00000435706 NAPAP54920 295 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 GSTA5Q7RTV2 222 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 DTNBO60941 627 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 TSPY3P0CV98 308 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 TSPY8P0CW00 308 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 MAP2K2P36507 400 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 G2E3Q7L622 706 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 RGS22Q8NE09 1264 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 TRIM7Q9C029 511 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 NFE2L3Q9Y4A8 694 aa25.26■■□□□ 1.63
TOP2B-204ENST00000435706 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 VWA3AA6NCI4 1184 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 DTHD1Q6ZMT9 781 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 SEC62Q99442 399 aaKnown RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 NOC4LQ9BVI4 516 aaKnown RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 NCOA5Q9HCD5 579 aaKnown RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 TEX13AQ9BXU3 409 aaPredicted RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 DNAI2Q9GZS0 605 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 TCOF1Q13428 1488 aaKnown RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 CUTAO60888 179 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 CALCOCO2Q13137 446 aa25.25■■□□□ 1.63
TOP2B-204ENST00000435706 SECISBP2LQ93073 1101 aaKnown RBP25.25■■□□□ 1.63
TOP2B-204ENST00000435706 NAA16Q6N069 864 aaPredicted RBP25.24■■□□□ 1.63
TOP2B-204ENST00000435706 KRT79Q5XKE5 535 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 PYCARDQ9ULZ3 195 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 MRVI1Q9Y6F6 885 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 PPIP5K1Q6PFW1 1433 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 TRMT1LQ7Z2T5 733 aaKnown RBP25.24■■□□□ 1.63
TOP2B-204ENST00000435706 CABS1Q96KC9 395 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 TSNARE1Q96NA8 513 aa25.24■■□□□ 1.63
TOP2B-204ENST00000435706 PLIN2Q99541 437 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 FOXO3O43524 673 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 PPP1R7Q15435 360 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 LONRF3Q496Y0 759 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 NKIRAS1Q9NYS0 192 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 TRIM35Q9UPQ4 493 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 GSPT1P15170 499 aaKnown RBP25.23■■□□□ 1.63
TOP2B-204ENST00000435706 FERP16591 822 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 SND1Q7KZF4 910 aaKnown RBP eCLIP25.23■■□□□ 1.63
TOP2B-204ENST00000435706 LMNTD2Q8IXW0 634 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 FAM227BQ96M60 508 aa25.23■■□□□ 1.63
TOP2B-204ENST00000435706 BICC1Q9H694 974 aaKnown RBP25.23■■□□□ 1.63
TOP2B-204ENST00000435706 PCK1P35558 622 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 SARNPP82979 210 aaKnown RBP25.22■■□□□ 1.63
TOP2B-204ENST00000435706 LRRC8AQ8IWT6 810 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 POLR2DO15514 142 aaKnown RBP25.22■■□□□ 1.63
TOP2B-204ENST00000435706 EFCAB8A8MWE9 144 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 C6orf50Q9HD87 102 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 GNAT2P19087 354 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 ZNF174Q15697 407 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 OTUD7BQ6GQQ9 843 aa25.22■■□□□ 1.63
TOP2B-204ENST00000435706 KIAA1524Q8TCG1 905 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms