RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 TRMT1Q9NXH9 659 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 EPB41P11171 864 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 TFCP2Q12800 502 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 NMIQ13287 307 aaPredicted RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 SMCR8Q8TEV9 937 aaPredicted RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 RNF34Q969K3 372 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 TACC1O75410 805 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 HOXC9P31274 260 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 KRT83P78385 493 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 BIRC2Q13490 618 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 TMEM110-MUSTN1A8MSY1 372 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 AKNAD1Q5T1N1 836 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 CFAP58Q5T655 872 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 GABPB2Q8TAK5 448 aaPredicted RBP12□□□□□ -0.49
LDLRAD4-204ENST00000435606 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 HELLSQ9NRZ9 838 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 JAG2Q9Y219 1238 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 SDSP20132 328 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 NACA2Q9H009 215 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 FAM169AQ9Y6X4 670 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 SSFA2P28290 1259 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 TRPC3Q13507 836 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 CCDC63Q8NA47 563 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 DHX58Q96C10 678 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 ESYT1Q9BSJ8 1104 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 CFAP65Q6ZU64 1925 aaKnown RBP12□□□□□ -0.49
LDLRAD4-204ENST00000435606 PTPDC1A2A3K4 754 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 TBX22Q9Y458 520 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 UVSSAQ2YD98 709 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 SV2BQ7L1I2 683 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
LDLRAD4-204ENST00000435606 CCDC171Q6TFL3 1326 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 ITGA6P23229 1130 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 TBC1D22AQ8WUA7 517 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 SBNO2Q9Y2G9 1366 aa12□□□□□ -0.49
LDLRAD4-204ENST00000435606 ATP10BO94823 1461 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 ESPNB1AK53 854 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 PPFIA3O75145 1194 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 CCDC184Q52MB2 194 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 RNF187Q5TA31 235 aaPredicted RBP11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 BRAPQ7Z569 592 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 MRPL50Q8N5N7 158 aaKnown RBP11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 BIRC3Q13489 604 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 SPATA24Q86W54 205 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 PABPC4Q13310 644 aaKnown RBP eCLIP11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 USP25Q9UHP3 1055 aa11.99□□□□□ -0.49
LDLRAD4-204ENST00000435606 KRT5P13647 590 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 GIMAP7Q8NHV1 300 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 RAD50Q92878 1312 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 SPTLC2O15270 562 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 MARCKSP29966 332 aaPredicted RBP11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 DLGAP5Q15398 846 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 MBD4O95243 580 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 KCNA6P17658 529 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 PLCD1P51178 756 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 HAUS7Q99871 368 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 ARID5AQ03989 594 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 DDX21Q9NR30 783 aaKnown RBP eCLIP11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 GNG11P61952 73 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 IQUBQ8NA54 791 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 CALUO43852 315 aaPredicted RBP11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 FBLN1P23142 703 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 PA2G4Q9UQ80 394 aaKnown RBP11.98□□□□□ -0.49
LDLRAD4-204ENST00000435606 ADCY5O95622 1261 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 MYCLP12524 364 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 CCT6AP40227 531 aaKnown RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 NR1I2O75469 434 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 STK10O94804 968 aaKnown RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 KRT86O43790 486 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 ZNF790Q6PG37 636 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 CEP128Q6ZU80 1094 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 DHX32Q7L7V1 743 aaKnown RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 CSRNP2Q9H175 543 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 PAIP2Q9BPZ3 127 aaKnown RBP11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
LDLRAD4-204ENST00000435606 HARSP12081 509 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms