RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CAVIN2O95810 425 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 FGFR2P21802 821 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 LUZP1Q86V48 1076 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 LPIN2Q92539 896 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 TTC12Q9H892 705 aaPredicted RBP21.75■■□□□ 1.07
CLK1-205ENST00000434813 CTAGE5O15320 804 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 KCNQ2O43526 872 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 PHKA1P46020 1223 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 TDRD7Q8NHU6 1098 aaKnown RBP21.75■■□□□ 1.07
CLK1-205ENST00000434813 NBPF3Q9H094 633 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 CCDC87Q9NVE4 849 aa21.75■■□□□ 1.07
CLK1-205ENST00000434813 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
CLK1-205ENST00000434813 GUCY1B3Q02153 619 aa21.74■■□□□ 1.07
CLK1-205ENST00000434813 MPNDQ8N594 471 aa21.74■■□□□ 1.07
CLK1-205ENST00000434813 ZNF830Q96NB3 372 aaPredicted RBP21.74■■□□□ 1.07
CLK1-205ENST00000434813 QTRT2Q9H974 415 aaKnown RBP21.74■■□□□ 1.07
CLK1-205ENST00000434813 LAMB2P55268 1798 aa21.74■■□□□ 1.07
CLK1-205ENST00000434813 PPFIA3O75145 1194 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 IDH1O75874 414 aaKnown RBP21.73■■□□□ 1.07
CLK1-205ENST00000434813 CCAR1Q8IX12 1150 aaKnown RBP21.73■■□□□ 1.07
CLK1-205ENST00000434813 RGS22Q8NE09 1264 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 TRPC5Q9UL62 973 aaPredicted RBP21.73■■□□□ 1.07
CLK1-205ENST00000434813 GOLGA6L6A8MZA4 724 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 PDE6AP16499 860 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 CRKLP46109 303 aaKnown RBP21.73■■□□□ 1.07
CLK1-205ENST00000434813 TRDNQ13061 729 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 ZMYM6O95789 1325 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
CLK1-205ENST00000434813 TCRBV5S4A2TA0A5A2 114 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 CCDC73Q6ZRK6 1079 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 GOLPH3LQ9H4A5 285 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 RTEL1Q9NZ71 1219 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 TBC1D10CQ8IV04 446 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 C8orf76Q96K31 380 aa21.72■■□□□ 1.07
CLK1-205ENST00000434813 ZNF165P49910 485 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 FAM160A1Q05DH4 1040 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 SNW1Q13573 536 aaKnown RBP21.71■■□□□ 1.07
CLK1-205ENST00000434813 INTS5Q6P9B9 1019 aaKnown RBP21.71■■□□□ 1.07
CLK1-205ENST00000434813 ENGASEQ8NFI3 743 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 FBXO18Q8NFZ0 1043 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 SPTLC3Q9NUV7 552 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 ORC3Q9UBD5 711 aaPredicted RBP21.71■■□□□ 1.07
CLK1-205ENST00000434813 RGS17Q9UGC6 210 aaPredicted RBP21.71■■□□□ 1.07
CLK1-205ENST00000434813 WWC3Q9ULE0 1092 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
CLK1-205ENST00000434813 CPLX1O14810 134 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 SLC5A1P13866 664 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 DNAJC25Q9H1X3 360 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 ANGEL1Q9UNK9 670 aaKnown RBP21.7■■□□□ 1.06
CLK1-205ENST00000434813 ITPK1Q13572 414 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 NOLC1Q14978 699 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLK1-205ENST00000434813 SUSD4Q5VX71 490 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 BRAPQ7Z569 592 aa21.7■■□□□ 1.06
CLK1-205ENST00000434813 GJD4Q96KN9 370 aaPredicted RBP21.7■■□□□ 1.06
CLK1-205ENST00000434813 SH2B2O14492 632 aaPredicted RBP21.69■■□□□ 1.06
CLK1-205ENST00000434813 ME1P48163 572 aa21.69■■□□□ 1.06
CLK1-205ENST00000434813 ALX1Q15699 326 aa21.69■■□□□ 1.06
CLK1-205ENST00000434813 KCNF1Q9H3M0 494 aa21.69■■□□□ 1.06
CLK1-205ENST00000434813 RTL9Q8NET4 1388 aa21.69■■□□□ 1.06
CLK1-205ENST00000434813 KINO60870 393 aaKnown RBP21.68■■□□□ 1.06
CLK1-205ENST00000434813 STX1AQ16623 288 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 SPATA5Q8NB90 893 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 STRBPQ96SI9 672 aaKnown RBP21.68■■□□□ 1.06
CLK1-205ENST00000434813 POLR3EQ9NVU0 708 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 A0A1W2PQ27 194 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 A0A1W2PQ64 194 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 A0A1W2PQD8 194 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 YEATS4O95619 227 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 PARP10Q53GL7 1025 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.68■■□□□ 1.06
CLK1-205ENST00000434813 PLA2G4DQ86XP0 818 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 FSIP1Q8NA03 581 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 AIDAQ96BJ3 306 aa21.68■■□□□ 1.06
CLK1-205ENST00000434813 UTP14AQ9BVJ6 771 aaKnown RBP21.68■■□□□ 1.06
CLK1-205ENST00000434813 APPP05067 770 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 OTUD7BQ6GQQ9 843 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 CYB5R4Q7L1T6 521 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 SPC24Q8NBT2 197 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 LINC00301Q8NCQ3 95 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 HELBQ8NG08 1087 aaPredicted RBP21.67■■□□□ 1.06
CLK1-205ENST00000434813 KCNG4Q8TDN1 519 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 MRPS27Q92552 414 aaKnown RBP21.67■■□□□ 1.06
CLK1-205ENST00000434813 PCDHA7Q9UN72 937 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 ZNF75DP51815 510 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 RASGRF1Q13972 1273 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 ADALQ6DHV7 355 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 TMEM87BQ96K49 555 aa21.67■■□□□ 1.06
CLK1-205ENST00000434813 CHD4Q14839 1912 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 MYSM1Q5VVJ2 828 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 KIAA1524Q8TCG1 905 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 MPHOSPH8Q99549 860 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 DENND2AQ9ULE3 1009 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 THSD7AQ9UPZ6 1657 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 ECM29Q5VYK3 1845 aa21.66■■□□□ 1.06
CLK1-205ENST00000434813 NEDD4P46934 1319 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 UQCRHLA0A096LP55 91 aa21.65■■□□□ 1.06
CLK1-205ENST00000434813 RRP9O43818 475 aaKnown RBP21.65■■□□□ 1.06
CLK1-205ENST00000434813 CDKL5O76039 1030 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms