RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FAM95CA0A1B0GW59 222 aa7.89□□□□□ -1.15
PTPN4-205ENST00000433888 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-205ENST00000433888 TAL1P17542 331 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-205ENST00000433888 RXRBP28702 533 aa7.89□□□□□ -1.15
PTPN4-205ENST00000433888 IRAK1P51617 712 aa7.89□□□□□ -1.15
PTPN4-205ENST00000433888 GATA6Q92908 595 aa7.89□□□□□ -1.15
PTPN4-205ENST00000433888 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
PTPN4-205ENST00000433888 WNT11O96014 354 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 IGHA2P01877 340 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 ADMP35318 185 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 NFKBIBQ15653 356 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 MSMPQ1L6U9 139 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 FAM129BQ96TA1 746 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 TRIM56Q9BRZ2 755 aaKnown RBP7.88□□□□□ -1.15
PTPN4-205ENST00000433888 BRPF3Q9ULD4 1205 aa7.88□□□□□ -1.15
PTPN4-205ENST00000433888 H3BRB1 525 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 ADH5P11766 374 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 MAOBP27338 520 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 USP11P51784 963 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 FBXL6Q8N531 539 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
PTPN4-205ENST00000433888 ATG3Q9NT62 314 aa7.87□□□□□ -1.15
PTPN4-205ENST00000433888 B3GALT4O96024 378 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 CYP11A1P05108 521 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 FOSL1P15407 271 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 ITPKAP23677 461 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 POU4F3Q15319 338 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 CPSF6Q16630 551 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPN4-205ENST00000433888 PAOXQ6QHF9 649 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 GSX1Q9H4S2 264 aaPredicted RBP7.86□□□□□ -1.15
PTPN4-205ENST00000433888 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 GOLGA2P5Q9HBQ8 144 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 PRKAG2Q9UGJ0 569 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 LEMD3Q9Y2U8 911 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 ACTL7BQ9Y614 415 aa7.86□□□□□ -1.15
PTPN4-205ENST00000433888 PAX4O43316 350 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 ECEL1O95672 775 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 NEFLP07196 543 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 ORC1Q13415 861 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 NFXL1Q6ZNB6 911 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 GLYCTKQ8IVS8 523 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 GIMAP7Q8NHV1 300 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 OSBPL1AQ9BXW6 950 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 ADGRE2Q9UHX3 823 aa7.85□□□□□ -1.15
PTPN4-205ENST00000433888 CPNE3O75131 537 aaKnown RBP7.84□□□□□ -1.15
PTPN4-205ENST00000433888 PRNPP04156 253 aa7.84□□□□□ -1.15
PTPN4-205ENST00000433888 B4GALNT3Q6L9W6 998 aa7.84□□□□□ -1.15
PTPN4-205ENST00000433888 PTPN12Q05209 780 aaKnown RBP7.83□□□□□ -1.16
PTPN4-205ENST00000433888 SEZ6L2Q6UXD5 910 aa7.83□□□□□ -1.16
PTPN4-205ENST00000433888 TBC1D32Q96NH3 1257 aa7.83□□□□□ -1.16
PTPN4-205ENST00000433888 EHD4Q9H223 541 aa7.83□□□□□ -1.16
PTPN4-205ENST00000433888 NPHS2Q9NP85 383 aa7.83□□□□□ -1.16
PTPN4-205ENST00000433888 NDUFB5O43674 189 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 NFICP08651 508 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 METTL22Q9BUU2 404 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-205ENST00000433888 ACSS3Q9H6R3 686 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 ZFYVE1Q9HBF4 777 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 ABCB6Q9NP58 842 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 CCDC39Q9UFE4 941 aa7.82□□□□□ -1.16
PTPN4-205ENST00000433888 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
PTPN4-205ENST00000433888 FAM170BA6NMN3 283 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 GPR182O15218 404 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 AKAP4Q5JQC9 854 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
PTPN4-205ENST00000433888 GLIS3Q8NEA6 775 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 CCDC74AQ96AQ1 378 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 YIPF2Q9BWQ6 316 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 KRTAP9-9Q9BYP9 154 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 KRTAP9-4Q9BYQ2 154 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 DNAJC25Q9H1X3 360 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 SEMA6CQ9H3T2 930 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
PTPN4-205ENST00000433888 AOC2O75106 756 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 HP1BP3Q5SSJ5 553 aaPredicted RBP7.8□□□□□ -1.16
PTPN4-205ENST00000433888 DYMQ7RTS9 669 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 ABI1Q8IZP0 508 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 WDR18Q9BV38 432 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 NIF3L1Q9GZT8 377 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
PTPN4-205ENST00000433888 EIF1AYO14602 144 aaKnown RBP7.79□□□□□ -1.16
PTPN4-205ENST00000433888 CYP26A1O43174 497 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 TXKP42681 527 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 MAP7Q14244 749 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 COL19A1Q14993 1142 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
PTPN4-205ENST00000433888 CORO1BQ9BR76 489 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 RAD18Q9NS91 495 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
PTPN4-205ENST00000433888 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
PTPN4-205ENST00000433888 DYNC1LI2O43237 492 aaPredicted RBP7.78□□□□□ -1.16
PTPN4-205ENST00000433888 RAB6AP20340 208 aa7.78□□□□□ -1.16
PTPN4-205ENST00000433888 ASPAP45381 313 aa7.78□□□□□ -1.16
PTPN4-205ENST00000433888 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
PTPN4-205ENST00000433888 AP3B2Q13367 1082 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms