RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RNF208Q9H0X6 261 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 SUGCTQ9HAC7 445 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 EIF4BP23588 611 aaKnown RBP6.02□□□□□ -1.45
LINC01239-201ENST00000433645 IREB2P48200 963 aaKnown RBP6.02□□□□□ -1.45
LINC01239-201ENST00000433645 MFAP1P55081 439 aaKnown RBP6.02□□□□□ -1.45
LINC01239-201ENST00000433645 HNRNPUQ00839 825 aaKnown RBP eCLIP6.02□□□□□ -1.45
LINC01239-201ENST00000433645 GSTM4Q03013 218 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 HGSNATQ68CP4 663 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 SCARA3Q6AZY7 606 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 ACAD11Q709F0 780 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 TMC4Q7Z404 712 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 TMPRSS13Q9BYE2 586 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 TMEM39AQ9NV64 488 aa6.02□□□□□ -1.45
LINC01239-201ENST00000433645 DDX3YO15523 660 aaKnown RBP6.01□□□□□ -1.45
LINC01239-201ENST00000433645 WISP1O95388 367 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 NLRP12P59046 1061 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 FAAP100Q0VG06 881 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 TRIM26Q12899 539 aaPredicted RBP6.01□□□□□ -1.45
LINC01239-201ENST00000433645 EXOSC6Q5RKV6 272 aaKnown RBP6.01□□□□□ -1.45
LINC01239-201ENST00000433645 SMG8Q8ND04 991 aaKnown RBP6.01□□□□□ -1.45
LINC01239-201ENST00000433645 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 TRIM56Q9BRZ2 755 aaKnown RBP6.01□□□□□ -1.45
LINC01239-201ENST00000433645 RUSC1Q9BVN2 902 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 BCL11AQ9H165 835 aa6.01□□□□□ -1.45
LINC01239-201ENST00000433645 XPCQ01831 940 aaPredicted RBP6□□□□□ -1.45
LINC01239-201ENST00000433645 POU4F3Q15319 338 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 ZNF326Q5BKZ1 582 aaKnown RBP6□□□□□ -1.45
LINC01239-201ENST00000433645 NECAB3Q96P71 396 aaPredicted RBP6□□□□□ -1.45
LINC01239-201ENST00000433645 CORO1BQ9BR76 489 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 CYP4F12Q9HCS2 524 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 TPSG1Q9NRR2 321 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 KRT82Q9NSB4 513 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 PARP2Q9UGN5 583 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 AKAP2Q9Y2D5 859 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 SAMM50Q9Y512 469 aa6□□□□□ -1.45
LINC01239-201ENST00000433645 USP17L7P0C7H9 530 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 MAOBP27338 520 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 ST13P50502 369 aaKnown RBP5.99□□□□□ -1.45
LINC01239-201ENST00000433645 PSMD2Q13200 908 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 NKAPLQ5M9Q1 402 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 SLC51AQ86UW1 340 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 FAM46AQ96IP4 442 aaKnown RBP5.99□□□□□ -1.45
LINC01239-201ENST00000433645 MEGF10Q96KG7 1140 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 USP26Q9BXU7 913 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 EMILIN2Q9BXX0 1053 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
LINC01239-201ENST00000433645 ALX3O95076 343 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 TIAF1O95411 115 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 GLB1P16278 677 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 NME2P22392 152 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 NUTM2GQ5VZR2 741 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 SV2BQ7L1I2 683 aa5.98□□□□□ -1.45
LINC01239-201ENST00000433645 GPN3Q9UHW5 284 aaPredicted RBP5.98□□□□□ -1.45
LINC01239-201ENST00000433645 SORBS3O60504 671 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
LINC01239-201ENST00000433645 ARNTP27540 789 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 DOC2BQ14184 412 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 FDX2Q6P4F2 183 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.97□□□□□ -1.45
LINC01239-201ENST00000433645 PDZD3Q86UT5 571 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 AGGF1Q8N302 714 aaeCLIP5.97□□□□□ -1.45
LINC01239-201ENST00000433645 TP53INP1Q96A56 240 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 UBL7Q96S82 380 aaPredicted RBP5.97□□□□□ -1.45
LINC01239-201ENST00000433645 CACNA2D2Q9NY47 1150 aa5.97□□□□□ -1.45
LINC01239-201ENST00000433645 USP31Q70CQ4 1352 aa5.96□□□□□ -1.45
LINC01239-201ENST00000433645 ENC1O14682 589 aa5.96□□□□□ -1.46
LINC01239-201ENST00000433645 DLGAP3O95886 979 aa5.96□□□□□ -1.46
LINC01239-201ENST00000433645 LRRC14Q15048 493 aa5.96□□□□□ -1.46
LINC01239-201ENST00000433645 RSPO4Q2I0M5 234 aaPredicted RBP5.96□□□□□ -1.46
LINC01239-201ENST00000433645 CRELD1Q96HD1 420 aa5.96□□□□□ -1.46
LINC01239-201ENST00000433645 MYRFLQ96LU7 910 aa5.96□□□□□ -1.46
LINC01239-201ENST00000433645 NOC4LQ9BVI4 516 aaKnown RBP5.96□□□□□ -1.46
LINC01239-201ENST00000433645 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 DHX15O43143 795 aaKnown RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 SART1O43290 800 aaKnown RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 RLBP1P12271 317 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 RPS26P62854 115 aaKnown RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 ZNF252P-AS1Q0IIN9 211 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 PRR23CQ6ZRP0 262 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 ARMC10Q8N2F6 343 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 GIPC2Q8TF65 315 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 GSX1Q9H4S2 264 aaPredicted RBP5.95□□□□□ -1.46
LINC01239-201ENST00000433645 MRS2Q9HD23 443 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 CYP8B1Q9UNU6 501 aa5.95□□□□□ -1.46
LINC01239-201ENST00000433645 DYRK3O43781 588 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 AOC2O75106 756 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 TRIM37O94972 964 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 CTSBP07858 339 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 SLFN14P0C7P3 912 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 BMP6P22004 513 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 ZNF157P51786 506 aaPredicted RBP5.94□□□□□ -1.46
LINC01239-201ENST00000433645 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
LINC01239-201ENST00000433645 KIF4BQ2VIQ3 1234 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 TPTE2Q6XPS3 522 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms