RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SUGT1Q9Y2Z0 365 aa18.97■□□□□ 0.63
TREX1-201ENST00000433541 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
TREX1-201ENST00000433541 MYO5AQ9Y4I1 1855 aaKnown RBP18.97■□□□□ 0.63
TREX1-201ENST00000433541 PRDX5P30044 214 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 CRKP46108 304 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 GRIK5Q16478 980 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 ERICH6Q7L0X2 663 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 SULF1Q8IWU6 871 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 GCC1Q96CN9 775 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 RAI14Q9P0K7 980 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
TREX1-201ENST00000433541 PDS5AQ29RF7 1337 aaKnown RBP18.96■□□□□ 0.63
TREX1-201ENST00000433541 WNT10BO00744 389 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 KRT26Q7Z3Y9 468 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 GLIS2Q9BZE0 524 aaPredicted RBP18.95■□□□□ 0.62
TREX1-201ENST00000433541 ZNF408Q9H9D4 720 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 SERPINA10Q9UK55 444 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 ASTN2O75129 1339 aaPredicted RBP18.95■□□□□ 0.62
TREX1-201ENST00000433541 SALL1Q9NSC2 1324 aa18.95■□□□□ 0.62
TREX1-201ENST00000433541 TBC1D9Q6ZT07 1266 aa18.94■□□□□ 0.62
TREX1-201ENST00000433541 CDC37L1Q7L3B6 337 aa18.94■□□□□ 0.62
TREX1-201ENST00000433541 DNAJC2Q99543 621 aaKnown RBP18.94■□□□□ 0.62
TREX1-201ENST00000433541 VEZTQ9HBM0 779 aa18.94■□□□□ 0.62
TREX1-201ENST00000433541 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
TREX1-201ENST00000433541 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 ZAP70P43403 619 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 USP48Q86UV5 1035 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 SLF2Q8IX21 1173 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 SCAF8Q9UPN6 1271 aaKnown RBP18.93■□□□□ 0.62
TREX1-201ENST00000433541 AK9Q5TCS8 1911 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 MAST2Q6P0Q8 1798 aa18.93■□□□□ 0.62
TREX1-201ENST00000433541 ADM5C9JUS6 153 aa18.92■□□□□ 0.62
TREX1-201ENST00000433541 TRAF5O00463 557 aa18.92■□□□□ 0.62
TREX1-201ENST00000433541 DIXDC1Q155Q3 683 aa18.92■□□□□ 0.62
TREX1-201ENST00000433541 ZNF512BQ96KM6 892 aaPredicted RBP18.92■□□□□ 0.62
TREX1-201ENST00000433541 NDUFB9Q9Y6M9 179 aa18.92■□□□□ 0.62
TREX1-201ENST00000433541 HSPA6P17066 643 aa18.91■□□□□ 0.62
TREX1-201ENST00000433541 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
TREX1-201ENST00000433541 APOBEC3FQ8IUX4 373 aaKnown RBP18.91■□□□□ 0.62
TREX1-201ENST00000433541 MTMR14Q8NCE2 650 aa18.91■□□□□ 0.62
TREX1-201ENST00000433541 PRMT6Q96LA8 375 aaPredicted RBP18.91■□□□□ 0.62
TREX1-201ENST00000433541 NOL10Q9BSC4 688 aaKnown RBP18.91■□□□□ 0.62
TREX1-201ENST00000433541 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
TREX1-201ENST00000433541 PGAP2Q9UHJ9 254 aa18.91■□□□□ 0.62
TREX1-201ENST00000433541 IDH1O75874 414 aaKnown RBP18.9■□□□□ 0.62
TREX1-201ENST00000433541 IGHDP01880 384 aa18.9■□□□□ 0.62
TREX1-201ENST00000433541 GSTO1P78417 241 aa18.9■□□□□ 0.62
TREX1-201ENST00000433541 BOLA2Q9H3K6 86 aa18.9■□□□□ 0.62
TREX1-201ENST00000433541 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
TREX1-201ENST00000433541 PITPNM2Q9BZ72 1349 aa18.9■□□□□ 0.62
TREX1-201ENST00000433541 DOCK2Q92608 1830 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 ZBTB22O15209 634 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 ITGBL1O95965 494 aaPredicted RBP18.89■□□□□ 0.61
TREX1-201ENST00000433541 CYP2E1P05181 493 aaPredicted RBP18.89■□□□□ 0.61
TREX1-201ENST00000433541 APLP1P51693 650 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 MECOMQ03112 1051 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
TREX1-201ENST00000433541 HHIPL2Q6UWX4 724 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 ZDHHC15Q96MV8 337 aa18.89■□□□□ 0.61
TREX1-201ENST00000433541 MYH7P12883 1935 aa18.88■□□□□ 0.61
TREX1-201ENST00000433541 GOLIM4O00461 696 aa18.88■□□□□ 0.61
TREX1-201ENST00000433541 CELF2O95319 508 aaKnown RBP18.88■□□□□ 0.61
TREX1-201ENST00000433541 LDHCP07864 332 aa18.88■□□□□ 0.61
TREX1-201ENST00000433541 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
TREX1-201ENST00000433541 NAA16Q6N069 864 aaPredicted RBP18.88■□□□□ 0.61
TREX1-201ENST00000433541 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
TREX1-201ENST00000433541 ZNF70Q9UC06 446 aaPredicted RBP18.88■□□□□ 0.61
TREX1-201ENST00000433541 DAGLAQ9Y4D2 1042 aa18.88■□□□□ 0.61
TREX1-201ENST00000433541 TCP10L2B9ZVM9 353 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 ATP5JP18859 108 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 NF2P35240 595 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 TNNI2P48788 182 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 MAP3K12Q12852 859 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 TNFAIP1Q13829 316 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 ZBED3Q96IU2 234 aaPredicted RBP18.87■□□□□ 0.61
TREX1-201ENST00000433541 PASKQ96RG2 1323 aa18.87■□□□□ 0.61
TREX1-201ENST00000433541 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
TREX1-201ENST00000433541 ABT1Q9ULW3 272 aaKnown RBP18.87■□□□□ 0.61
TREX1-201ENST00000433541 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 TMEM88BA6NKF7 163 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 ERC2O15083 957 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 BTDP43251 543 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 CACNB3P54284 484 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 SPDYE2Q495Y8 402 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
TREX1-201ENST00000433541 CDCA5Q96FF9 252 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 MRIQ9BWK5 157 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 ANTXR1Q9H6X2 564 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 PAG1Q9NWQ8 432 aa18.86■□□□□ 0.61
TREX1-201ENST00000433541 AOX1Q06278 1338 aa18.85■□□□□ 0.61
TREX1-201ENST00000433541 MX1P20591 662 aa18.85■□□□□ 0.61
TREX1-201ENST00000433541 TTLL12Q14166 644 aaPredicted RBP18.85■□□□□ 0.61
TREX1-201ENST00000433541 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms