RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MYH15Q9Y2K3 1946 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 DEXIO95424 95 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PDLIM2Q96JY6 352 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 DENND2AQ9ULE3 1009 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NID2Q14112 1375 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PLCD3Q8N3E9 789 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 RILPL2Q969X0 211 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TRIM5Q9C035 493 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 USP44Q9H0E7 712 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NHSL1Q5SYE7 1610 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 VPS37CA5D8V6 355 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 CKAP4Q07065 602 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 CCDC94Q9BW85 323 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NAPBQ9H115 298 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ADCY9O60503 1353 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 CCAR1Q8IX12 1150 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 MAP4K1Q92918 833 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 HAUS7Q99871 368 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PLCD4Q9BRC7 762 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 RNF26Q9BY78 433 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 RGPD5Q99666 1765 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 C5P01031 1676 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NPHP1O15259 732 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 USPL1Q5W0Q7 1092 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 UBE3BQ7Z3V4 1068 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 WDR66Q8TBY9 1149 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 APPBP2Q92624 585 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TNRC6CQ9HCJ0 1690 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 EEF1GP26641 437 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 GSDMAQ96QA5 445 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 KCND2Q9NZV8 630 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 MYH8P13535 1937 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PI4KAP2A4QPH2 592 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TOM1O60784 492 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ATP2B3Q16720 1220 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TOM1L2Q6ZVM7 507 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PI4KAP1Q8N8J0 262 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 IQUBQ8NA54 791 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ZCRB1Q8TBF4 217 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PHACTR3Q96KR7 559 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 EYA3Q99504 573 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 SLC12A7Q9Y666 1083 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 SPATA31A6Q5VVP1 1343 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 GLI3P10071 1580 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 GOLGA6L7A0A1B0GV03 622 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ME1P48163 572 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PPP4R3CPQ6ZMV5 832 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 MFSD6Q6ZSS7 791 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PIBF1Q8WXW3 757 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NAP1L5Q96NT1 182 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NT5C3AQ9H0P0 336 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 TTF2Q9UNY4 1162 aaKnown RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ERLIN2O94905 339 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 PIP4K2BP78356 416 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 LPIN2Q92539 896 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RBM33Q96EV2 1170 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 MXD3Q9BW11 206 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 EDEM3Q9BZQ6 932 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 SPATA31A3Q5VYP0 1347 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TTC39AQ5SRH9 613 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 WDR78Q5VTH9 848 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 NEK1Q96PY6 1258 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 IVLP07476 585 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 FDX1P10109 184 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 EVA1CP58658 441 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TMX3Q96JJ7 454 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 FAM124BQ9H5Z6 455 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ARAP2Q8WZ64 1704 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 FRAT2O75474 233 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CALRP27797 417 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TNIP1Q15025 636 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 FNBP4Q8N3X1 1017 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 BRIP1Q9BX63 1249 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CLSTN2Q9H4D0 955 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 PPP1R1BQ9UD71 204 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ATP8B3O60423 1300 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CCDC69A6NI79 296 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 GNA14O95837 355 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 KRI1Q8N9T8 703 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 KDM6AO15550 1401 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RREB1Q92766 1687 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 STX10O60499 249 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 NPM3O75607 178 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 MTHFSDQ2M296 383 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 BBXQ8WY36 941 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 BCL2L13Q9BXK5 485 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 STRN4Q9NRL3 753 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TBC1D7Q9P0N9 293 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 BZW2Q9Y6E2 419 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RRS1Q15050 365 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 PPFIBP1Q86W92 1011 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CCAR2Q8N163 923 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TDRD7Q8NHU6 1098 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TMOD2Q9NZR1 351 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF609O15014 1411 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CETN2P41208 172 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF165P49910 485 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms