RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 FAM184BQ9ULE4 1060 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 FAM83GA6ND36 823 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 SMIM24O75264 130 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 BMP15O95972 392 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CTNNA2P26232 953 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 TMTC1Q8IUR5 882 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CALML4Q96GE6 196 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 PLVAPQ9BX97 442 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 NKIRAS1Q9NYS0 192 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 RALGAPBQ86X10 1494 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 GOLGA8KD6RF30 607 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ARID5AQ03989 594 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 PAK2Q13177 524 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CCDC25Q86WR0 208 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 HIP1RO75146 1068 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 STK38LQ9Y2H1 464 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CETN3O15182 167 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 LUC7L3O95232 432 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 STAT6P42226 847 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 NLRP12P59046 1061 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 PPP2R2CQ9Y2T4 447 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CLTAP09496 248 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 SH2D4BQ5SQS7 431 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 RPGRIP1Q96KN7 1286 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CFAP57Q96MR6 1250 aa11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-203ENST00000432907 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 DTNBO60941 627 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 TRIM14Q14142 442 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 ARHGEF2Q92974 986 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 USP5P45974 858 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 ZBTB43O43298 467 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 CWC25Q9NXE8 425 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 NFE2L3Q9Y4A8 694 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 ATF3P18847 181 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 PRPHP41219 470 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 ZKSCAN8Q15776 578 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 CCDC26Q8TAB7 109 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 VCX3BQ9H321 246 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 SNX14Q9Y5W7 946 aa11.72□□□□□ -0.53
PKNOX1-203ENST00000432907 CIB2O75838 187 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 VPS16Q9H269 839 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 A0A087WZG4 1122 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 ADKP55263 362 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 EVA1CP58658 441 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 MAP7Q14244 749 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 MUM1Q2TAK8 710 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 SAR1BQ9Y6B6 198 aa11.71□□□□□ -0.53
PKNOX1-203ENST00000432907 KIF1CO43896 1103 aaKnown RBP11.71□□□□□ -0.54
PKNOX1-203ENST00000432907 RNF40O75150 1001 aa11.71□□□□□ -0.54
PKNOX1-203ENST00000432907 RNASE9P60153 205 aaKnown RBP11.71□□□□□ -0.54
PKNOX1-203ENST00000432907 GKAP1Q5VSY0 366 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms