RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GATA6Q92908 595 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 HHIPQ96QV1 700 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 MKNK1Q9BUB5 465 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 TSPAN15O95858 294 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 FUT4P22083 530 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 CFPP27918 469 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 MAP7Q14244 749 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 NAA30Q147X3 362 aaPredicted RBP4.31□□□□□ -1.72
CDC40-204ENST00000431461 EXOSC6Q5RKV6 272 aaKnown RBP4.31□□□□□ -1.72
CDC40-204ENST00000431461 CAPN12Q6ZSI9 719 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 TTLL10Q6ZVT0 673 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 ELP3Q9H9T3 547 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 CXXC1Q9P0U4 656 aaPredicted RBP4.31□□□□□ -1.72
CDC40-204ENST00000431461 TMEM63CQ9P1W3 806 aa4.31□□□□□ -1.72
CDC40-204ENST00000431461 RPLP1P05386 114 aaKnown RBP4.3□□□□□ -1.72
CDC40-204ENST00000431461 RAB6AP20340 208 aa4.3□□□□□ -1.72
CDC40-204ENST00000431461 DBX2Q6ZNG2 339 aa4.3□□□□□ -1.72
CDC40-204ENST00000431461 SOX17Q9H6I2 414 aaPredicted RBP4.3□□□□□ -1.72
CDC40-204ENST00000431461 DZANK1Q9NVP4 752 aa4.3□□□□□ -1.72
CDC40-204ENST00000431461 CNTN3Q9P232 1028 aa4.3□□□□□ -1.72
CDC40-204ENST00000431461 ZMIZ1Q9ULJ6 1067 aa4.3□□□□□ -1.72
CDC40-204ENST00000431461 DLGAP3O95886 979 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 ZNF765Q7L2R6 523 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 ZNF438Q7Z4V0 828 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 AMIGO3Q86WK7 504 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 C1QL4Q86Z23 238 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 WFDC3Q8IUB2 231 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 C2CD4AQ8NCU7 369 aaPredicted RBP4.29□□□□□ -1.72
CDC40-204ENST00000431461 PMEPA1Q969W9 287 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 NUDT16Q96DE0 195 aaKnown RBP4.29□□□□□ -1.72
CDC40-204ENST00000431461 RC3H2Q9HBD1 1191 aaKnown RBP4.29□□□□□ -1.72
CDC40-204ENST00000431461 LGR6Q9HBX8 967 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 SOX13Q9UN79 622 aa4.29□□□□□ -1.72
CDC40-204ENST00000431461 LRRC10BA6NIK2 292 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 PDE2AO00408 941 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 SOX1O00570 391 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 CES1P23141 567 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 SRPK2P78362 688 aaKnown RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 SOX4Q06945 474 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 BNIP3Q12983 259 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 SPRED2Q7Z698 418 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 C14orf37Q86TY3 774 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 ANKLE2Q86XL3 938 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 LRRC56Q8IYG6 542 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 C1orf127Q8N9H9 656 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 TMEM102Q8N9M5 508 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 STK32AQ8WU08 396 aa4.28□□□□□ -1.72
CDC40-204ENST00000431461 CLP1Q92989 425 aaKnown RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 ZNF777Q9ULD5 760 aaPredicted RBP4.28□□□□□ -1.72
CDC40-204ENST00000431461 LOC100289279A0A1B0GTE1 492 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 NFICP08651 508 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 CD96P40200 585 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 OGFOD3Q6PK18 319 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 LCNL1Q6ZST4 164 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 FLAD1Q8NFF5 587 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 BSNDQ8WZ55 320 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 NXPE3Q969Y0 559 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 VAV3Q9UKW4 847 aa4.27□□□□□ -1.73
CDC40-204ENST00000431461 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.26□□□□□ -1.73
CDC40-204ENST00000431461 ATG7O95352 703 aa4.26□□□□□ -1.73
CDC40-204ENST00000431461 RNASE1P07998 156 aaKnown RBP4.26□□□□□ -1.73
CDC40-204ENST00000431461 ZSCAN22P10073 491 aaPredicted RBP4.26□□□□□ -1.73
CDC40-204ENST00000431461 IKBKEQ14164 716 aa4.26□□□□□ -1.73
CDC40-204ENST00000431461 CYP27C1Q4G0S4 372 aa4.26□□□□□ -1.73
CDC40-204ENST00000431461 HP1BP3Q5SSJ5 553 aaPredicted RBP4.26□□□□□ -1.73
CDC40-204ENST00000431461 VN1R5Q7Z5H4 357 aa4.26□□□□□ -1.73
CDC40-204ENST00000431461 PI4K2BQ8TCG2 481 aa4.26□□□□□ -1.73
CDC40-204ENST00000431461 MBNL3Q9NUK0 354 aaKnown RBP4.26□□□□□ -1.73
CDC40-204ENST00000431461 A6NHS1 94 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 PCSK2P16519 638 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 GSTM4Q03013 218 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 PRKCQQ04759 706 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 TMEM164Q5U3C3 297 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 ATCAYQ86WG3 371 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 ZSWIM9Q86XI8 627 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 NETO1Q8TDF5 533 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 ASAP3Q8TDY4 903 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 CHRDQ9H2X0 955 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 GGNBP2Q9H3C7 697 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 ZFYVE1Q9HBF4 777 aa4.25□□□□□ -1.73
CDC40-204ENST00000431461 CD8BP10966 210 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 SEZ6L2Q6UXD5 910 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 DYMQ7RTS9 669 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 LRRN4CLQ8ND94 238 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 TTC16Q8NEE8 873 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 EDEM1Q92611 657 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 OSMRQ99650 979 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 MKNK2Q9HBH9 465 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 ADAMTS6Q9UKP5 1117 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 AP4E1Q9UPM8 1137 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 ACTL7BQ9Y614 415 aa4.24□□□□□ -1.73
CDC40-204ENST00000431461 DYNC1LI2O43237 492 aaPredicted RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 PDGFAP04085 211 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 ESRRAP11474 423 aaPredicted RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 ADH5P11766 374 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 MZF1P28698 734 aaPredicted RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 CTSWP56202 376 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 C8orf34Q49A92 452 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 NOM1Q5C9Z4 860 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms