RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 CACNB3P54284 484 aa17.46■□□□□ 0.39
SEC13-211ENST00000431352 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.39
SEC13-211ENST00000431352 FBXO33Q7Z6M2 555 aa17.46■□□□□ 0.39
SEC13-211ENST00000431352 ANKRD13AQ8IZ07 590 aa17.46■□□□□ 0.39
SEC13-211ENST00000431352 TMEM39BQ9GZU3 492 aa17.46■□□□□ 0.39
SEC13-211ENST00000431352 PDE8BO95263 885 aa17.45■□□□□ 0.38
SEC13-211ENST00000431352 BCAMP50895 628 aa17.45■□□□□ 0.38
SEC13-211ENST00000431352 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
SEC13-211ENST00000431352 FBXO46Q6PJ61 603 aaPredicted RBP17.45■□□□□ 0.38
SEC13-211ENST00000431352 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
SEC13-211ENST00000431352 CFHR5Q9BXR6 569 aa17.45■□□□□ 0.38
SEC13-211ENST00000431352 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
SEC13-211ENST00000431352 TNRC18O15417 2968 aaPredicted RBP17.44■□□□□ 0.38
SEC13-211ENST00000431352 TNNI2P48788 182 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 INHBEP58166 350 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 USP44Q9H0E7 712 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 TRIM17Q9Y577 477 aa17.44■□□□□ 0.38
SEC13-211ENST00000431352 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 CRHR2Q13324 411 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 PUM3Q15397 648 aaKnown RBP17.43■□□□□ 0.38
SEC13-211ENST00000431352 TBC1D22AQ8WUA7 517 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
SEC13-211ENST00000431352 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
SEC13-211ENST00000431352 UNCXA6NJT0 531 aa17.42■□□□□ 0.38
SEC13-211ENST00000431352 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
SEC13-211ENST00000431352 VGLL4Q14135 290 aa17.42■□□□□ 0.38
SEC13-211ENST00000431352 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
SEC13-211ENST00000431352 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
SEC13-211ENST00000431352 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
SEC13-211ENST00000431352 CD99L2Q8TCZ2 262 aa17.41■□□□□ 0.38
SEC13-211ENST00000431352 PTPN18Q99952 460 aa17.41■□□□□ 0.38
SEC13-211ENST00000431352 TMOD2Q9NZR1 351 aa17.41■□□□□ 0.38
SEC13-211ENST00000431352 LAMB1P07942 1786 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 EYA2O00167 538 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 SLC5A1P13866 664 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 SIL1Q9H173 461 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 CSADQ9Y600 493 aa17.4■□□□□ 0.38
SEC13-211ENST00000431352 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 SLC34A2O95436 690 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 FGFR2P21802 821 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
SEC13-211ENST00000431352 MAP3K9P80192 1104 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 HDLBPQ00341 1268 aaKnown RBP17.39■□□□□ 0.37
SEC13-211ENST00000431352 CCL15Q16663 113 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 MAST3O60307 1309 aa17.39■□□□□ 0.37
SEC13-211ENST00000431352 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
SEC13-211ENST00000431352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEC13-211ENST00000431352 BRI3BPQ8WY22 251 aa17.38■□□□□ 0.37
SEC13-211ENST00000431352 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
SEC13-211ENST00000431352 ZDHHC15Q96MV8 337 aa17.38■□□□□ 0.37
SEC13-211ENST00000431352 APOBEC3HQ6NTF7 200 aaKnown RBP17.37■□□□□ 0.37
SEC13-211ENST00000431352 LPIN2Q92539 896 aa17.37■□□□□ 0.37
SEC13-211ENST00000431352 MS4A4AQ96JQ5 239 aa17.37■□□□□ 0.37
SEC13-211ENST00000431352 WRNIP1Q96S55 665 aa17.37■□□□□ 0.37
SEC13-211ENST00000431352 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
SEC13-211ENST00000431352 MYH13Q9UKX3 1938 aa17.37■□□□□ 0.37
SEC13-211ENST00000431352 TESPA1A2RU30 521 aaPredicted RBP17.36■□□□□ 0.37
SEC13-211ENST00000431352 GTF2A2P52657 109 aa17.36■□□□□ 0.37
SEC13-211ENST00000431352 TAF1CQ15572 869 aaPredicted RBP17.36■□□□□ 0.37
SEC13-211ENST00000431352 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
SEC13-211ENST00000431352 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
SEC13-211ENST00000431352 EFCC1Q9HA90 598 aa17.36■□□□□ 0.37
SEC13-211ENST00000431352 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
SEC13-211ENST00000431352 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
SEC13-211ENST00000431352 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
SEC13-211ENST00000431352 SP3Q02447 781 aa17.35■□□□□ 0.37
SEC13-211ENST00000431352 DIXDC1Q155Q3 683 aa17.35■□□□□ 0.37
SEC13-211ENST00000431352 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
SEC13-211ENST00000431352 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
SEC13-211ENST00000431352 ZKSCAN4Q969J2 545 aaPredicted RBP17.35■□□□□ 0.37
SEC13-211ENST00000431352 SUGT1Q9Y2Z0 365 aa17.35■□□□□ 0.37
SEC13-211ENST00000431352 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 CAP1Q01518 475 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 MIGA2Q7L4E1 593 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 FAM83AQ86UY5 434 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 PA2G4Q9UQ80 394 aaKnown RBP17.34■□□□□ 0.37
SEC13-211ENST00000431352 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
SEC13-211ENST00000431352 PRDX5P30044 214 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 TCP10Q12799 353 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
SEC13-211ENST00000431352 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 API5Q9BZZ5 524 aaKnown RBP17.33■□□□□ 0.36
SEC13-211ENST00000431352 ZFYVE28Q9HCC9 887 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 GNL3LQ9NVN8 582 aaKnown RBP17.33■□□□□ 0.36
SEC13-211ENST00000431352 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 HTTP42858 3142 aa17.33■□□□□ 0.36
SEC13-211ENST00000431352 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
SEC13-211ENST00000431352 POTEFA5A3E0 1075 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 CIAO1O76071 339 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 ADORA1P30542 326 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 ERO1BQ86YB8 467 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms