RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 SPATA31A1Q5TZJ5 1347 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 SLIT2O94813 1529 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 EYA2O00167 538 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 TPM4P67936 248 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 GABPB1Q06547 395 aaPredicted RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 ELF2Q15723 593 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 NEDD4P46934 1319 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 KLF18A0A0U1RQI7 1052 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 BIN1O00499 593 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 HAND2P61296 217 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00839-202ENST00000429940 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
LINC00839-202ENST00000429940 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
LINC00839-202ENST00000429940 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 FBXO18Q8NFZ0 1043 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
LINC00839-202ENST00000429940 SPATA31A6Q5VVP1 1343 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 PRC1O43663 620 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 ARMCX5Q6P1M9 558 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 ZNF771Q7L3S4 317 aaPredicted RBP17.42■□□□□ 0.38
LINC00839-202ENST00000429940 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
LINC00839-202ENST00000429940 TJP1Q07157 1748 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 GLI3P10071 1580 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 ZNF202O95125 648 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00839-202ENST00000429940 NLRP12P59046 1061 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 FBXO38Q6PIJ6 1188 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 PPP1R13BQ96KQ4 1090 aa17.42■□□□□ 0.38
LINC00839-202ENST00000429940 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
LINC00839-202ENST00000429940 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
LINC00839-202ENST00000429940 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
LINC00839-202ENST00000429940 KRT222Q8N1A0 295 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00839-202ENST00000429940 USP21Q9UK80 565 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 CPLX1O14810 134 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 CIAO1O76071 339 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 GJB4Q9NTQ9 266 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 HPS5Q9UPZ3 1129 aa17.41■□□□□ 0.38
LINC00839-202ENST00000429940 NUP188Q5SRE5 1749 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
LINC00839-202ENST00000429940 FOXP2O15409 715 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 NRDCO43847 1150 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 DHX8Q14562 1220 aaKnown RBP17.4■□□□□ 0.38
LINC00839-202ENST00000429940 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
LINC00839-202ENST00000429940 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 PFKFB1P16118 471 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 ANO1Q5XXA6 986 aa17.4■□□□□ 0.38
LINC00839-202ENST00000429940 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
LINC00839-202ENST00000429940 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
LINC00839-202ENST00000429940 EXOC5O00471 708 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 FGAP02671 866 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 CMA1P23946 247 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 KCNJ6P48051 423 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 NCAPHQ15003 741 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 GORABQ5T7V8 394 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 SYT10Q6XYQ8 523 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 DISP2A7MBM2 1401 aa17.39■□□□□ 0.37
LINC00839-202ENST00000429940 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 AXDND1Q5T1B0 1012 aaPredicted RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 ANTXR2P58335 489 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
LINC00839-202ENST00000429940 MROH7-TTC4A0A0A0MT08 1334 aa17.38■□□□□ 0.37
LINC00839-202ENST00000429940 NPHP1O15259 732 aa17.37■□□□□ 0.37
LINC00839-202ENST00000429940 FANCCQ00597 558 aa17.37■□□□□ 0.37
LINC00839-202ENST00000429940 ISM2Q6H9L7 571 aa17.37■□□□□ 0.37
LINC00839-202ENST00000429940 AFF2P51816 1311 aa17.37■□□□□ 0.37
LINC00839-202ENST00000429940 A0A0G2JS52 829 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms