RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CLMNQ96JQ2 1002 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 USP44Q9H0E7 712 aa18.69■□□□□ 0.58
MSH5-208ENST00000429846 PDE4DIPQ5VU43 2346 aa18.68■□□□□ 0.58
MSH5-208ENST00000429846 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
MSH5-208ENST00000429846 CRKP46108 304 aa18.68■□□□□ 0.58
MSH5-208ENST00000429846 SOX10P56693 466 aa18.68■□□□□ 0.58
MSH5-208ENST00000429846 FBXO46Q6PJ61 603 aaPredicted RBP18.68■□□□□ 0.58
MSH5-208ENST00000429846 TDRD3Q9H7E2 651 aaKnown RBP18.68■□□□□ 0.58
MSH5-208ENST00000429846 MAST3O60307 1309 aa18.68■□□□□ 0.58
MSH5-208ENST00000429846 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
MSH5-208ENST00000429846 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
MSH5-208ENST00000429846 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
MSH5-208ENST00000429846 SUGT1Q9Y2Z0 365 aa18.67■□□□□ 0.58
MSH5-208ENST00000429846 IFIT1P09914 478 aaKnown RBP18.66■□□□□ 0.58
MSH5-208ENST00000429846 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
MSH5-208ENST00000429846 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
MSH5-208ENST00000429846 TEKT1Q969V4 418 aa18.66■□□□□ 0.58
MSH5-208ENST00000429846 TEPSINQ96N21 525 aa18.66■□□□□ 0.58
MSH5-208ENST00000429846 MRIQ9BWK5 157 aa18.66■□□□□ 0.58
MSH5-208ENST00000429846 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
MSH5-208ENST00000429846 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
MSH5-208ENST00000429846 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
MSH5-208ENST00000429846 FGFR2P21802 821 aa18.64■□□□□ 0.57
MSH5-208ENST00000429846 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
MSH5-208ENST00000429846 ZDHHC15Q96MV8 337 aa18.64■□□□□ 0.57
MSH5-208ENST00000429846 R3HDMLQ9H3Y0 253 aa18.64■□□□□ 0.57
MSH5-208ENST00000429846 FBXO3Q9UK99 471 aa18.64■□□□□ 0.57
MSH5-208ENST00000429846 TESPA1A2RU30 521 aaPredicted RBP18.63■□□□□ 0.57
MSH5-208ENST00000429846 TCP10L2B9ZVM9 353 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 EYA2O00167 538 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 SLC5A1P13866 664 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 GJA5P36382 358 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 BCAMP50895 628 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 TMEM39BQ9GZU3 492 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 TMOD2Q9NZR1 351 aa18.63■□□□□ 0.57
MSH5-208ENST00000429846 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
MSH5-208ENST00000429846 RPAP1Q9BWH6 1393 aaPredicted RBP18.63■□□□□ 0.57
MSH5-208ENST00000429846 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
MSH5-208ENST00000429846 GRIK5Q16478 980 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 FKBP1CQ5VVH2 108 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 LPIN2Q92539 896 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 OPTNQ96CV9 577 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 ELP3Q9H9T3 547 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
MSH5-208ENST00000429846 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
MSH5-208ENST00000429846 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
MSH5-208ENST00000429846 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
MSH5-208ENST00000429846 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
MSH5-208ENST00000429846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
MSH5-208ENST00000429846 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
MSH5-208ENST00000429846 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
MSH5-208ENST00000429846 CSADQ9Y600 493 aa18.61■□□□□ 0.57
MSH5-208ENST00000429846 TNRC18O15417 2968 aaPredicted RBP18.61■□□□□ 0.57
MSH5-208ENST00000429846 CIAO1O76071 339 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 MAP3K9P80192 1104 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 VGLL4Q14135 290 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 HHIPL2Q6UWX4 724 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 CDAN1Q8IWY9 1227 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
MSH5-208ENST00000429846 GTF2A2P52657 109 aa18.59■□□□□ 0.57
MSH5-208ENST00000429846 CRHR2Q13324 411 aa18.59■□□□□ 0.57
MSH5-208ENST00000429846 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
MSH5-208ENST00000429846 PTPN18Q99952 460 aa18.59■□□□□ 0.57
MSH5-208ENST00000429846 API5Q9BZZ5 524 aaKnown RBP18.59■□□□□ 0.57
MSH5-208ENST00000429846 TRIM17Q9Y577 477 aa18.59■□□□□ 0.57
MSH5-208ENST00000429846 SLC34A2O95436 690 aa18.58■□□□□ 0.56
MSH5-208ENST00000429846 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.56
MSH5-208ENST00000429846 ATG9AQ7Z3C6 839 aa18.58■□□□□ 0.56
MSH5-208ENST00000429846 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
MSH5-208ENST00000429846 RBBP6Q7Z6E9 1792 aaKnown RBP18.58■□□□□ 0.56
MSH5-208ENST00000429846 SPDYE5A6NIY4 337 aa18.57■□□□□ 0.56
MSH5-208ENST00000429846 CACNB3P54284 484 aa18.57■□□□□ 0.56
MSH5-208ENST00000429846 DCAF15Q66K64 600 aa18.57■□□□□ 0.56
MSH5-208ENST00000429846 GNL3LQ9NVN8 582 aaKnown RBP18.57■□□□□ 0.56
MSH5-208ENST00000429846 CEP126Q9P2H0 1117 aa18.57■□□□□ 0.56
MSH5-208ENST00000429846 CCL15-CCL14A0A0B4J2E2 113 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 ZBTB22O15209 634 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 SP3Q02447 781 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 CCL15Q16663 113 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
MSH5-208ENST00000429846 OTUD5Q96G74 571 aa18.56■□□□□ 0.56
MSH5-208ENST00000429846 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
MSH5-208ENST00000429846 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 SEMA3EO15041 775 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
MSH5-208ENST00000429846 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 CD99L2Q8TCZ2 262 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 BRI3BPQ8WY22 251 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 WRNIP1Q96S55 665 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 SIL1Q9H173 461 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
MSH5-208ENST00000429846 SNCAIPQ9Y6H5 919 aa18.55■□□□□ 0.56
MSH5-208ENST00000429846 CCER2I3L3R5 266 aa18.54■□□□□ 0.56
MSH5-208ENST00000429846 WDHD1O75717 1129 aaPredicted RBP18.54■□□□□ 0.56
MSH5-208ENST00000429846 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
MSH5-208ENST00000429846 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
MSH5-208ENST00000429846 EFCC1Q9HA90 598 aa18.54■□□□□ 0.56
MSH5-208ENST00000429846 ZFYVE28Q9HCC9 887 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms