RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 MYL6BP14649 208 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 PLEKHO1Q53GL0 409 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 DDX27Q96GQ7 796 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 HMGB2P26583 209 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 EVCP57679 992 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC80Q76M96 950 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 CENPKQ9BS16 269 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 TRMT1Q9NXH9 659 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 MYOM2P54296 1465 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 EVA1CP58658 441 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 PIP4K2CQ8TBX8 421 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 HNRNPCL1O60812 293 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 LARP6Q9BRS8 491 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 U3KPZ7 1027 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 TSHZ3Q63HK5 1081 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 NAA16Q6N069 864 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 SLC30A9Q6PML9 568 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 SMC6Q96SB8 1091 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
SYNPO2-202ENST00000429713 F6X3S4 739 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 ZNF75DP51815 510 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC28BQ9BUN5 200 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 ZNF148Q9UQR1 794 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 MYH13Q9UKX3 1938 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 MAP3K4Q9Y6R4 1608 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 KIAA1210Q9ULL0 1709 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 MAFGO15525 162 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC61Q9Y6R9 512 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 TEX13AQ9BXU3 409 aaPredicted RBP8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 ITIH3Q06033 890 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 ANO6Q4KMQ2 910 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC12Q8WUD4 166 aaPredicted RBP8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 IQGAP1P46940 1657 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC69A6NI79 296 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 PPP1R2P41236 205 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 IQCA1Q86XH1 822 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 RBM42Q9BTD8 480 aaKnown RBP8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 RPS6KA5O75582 802 aa8.47□□□□□ -1.05
SYNPO2-202ENST00000429713 RASEFQ8IZ41 740 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 EVI5LQ96CN4 794 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 TTC12Q9H892 705 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 GOPCQ9HD26 462 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 LIN7AO14910 233 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 CUL3Q13618 768 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 SPG7Q9UQ90 795 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 TMEM232C9JQI7 657 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 CHRM1P11229 460 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 SKIP12755 728 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 ZNF131P52739 623 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 CAPRIN2Q6IMN6 1127 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 N4BP2L2Q92802 583 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 NUDT16Q96DE0 195 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 ABCF2Q9UG63 623 aa8.46□□□□□ -1.05
SYNPO2-202ENST00000429713 CORO7P57737 925 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ELF2Q15723 593 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ZCCHC11Q5TAX3 1644 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 MRPS35P82673 323 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 GJC2Q5T442 439 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 EMBQ6PCB8 327 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 MICAL1Q8TDZ2 1067 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ZNF483Q8TF39 744 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ATP7AQ04656 1500 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 STAMBPO95630 424 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ELF1P32519 619 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 DISP1Q96F81 1524 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 TRIM21P19474 475 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 IFT20Q8IY31 132 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 TSC22D3Q99576 134 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 TMCC1O94876 653 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 LMNB1P20700 586 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 PCK1P35558 622 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 CC2D2BQ6DHV5 1058 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 KIF6Q6ZMV9 814 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 APBB1IPQ7Z5R6 666 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 HNRNPLLQ8WVV9 542 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 GGA2Q9UJY4 613 aa8.46□□□□□ -1.06
SYNPO2-202ENST00000429713 E7ENQ6 273 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms