RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 PNPLA7Q6ZV29 1317 aa23.3■■□□□ 1.32
CASC4-203ENST00000429162 PATL2C9JE40 543 aaKnown RBP23.3■■□□□ 1.32
CASC4-203ENST00000429162 ADRA2BP18089 450 aa23.3■■□□□ 1.32
CASC4-203ENST00000429162 LRSAM1Q6UWE0 723 aa23.3■■□□□ 1.32
CASC4-203ENST00000429162 AMIGO3Q86WK7 504 aa23.3■■□□□ 1.32
CASC4-203ENST00000429162 LRP2BPQ9P2M1 347 aa23.3■■□□□ 1.32
CASC4-203ENST00000429162 TNRC6CQ9HCJ0 1690 aaKnown RBP23.3■■□□□ 1.32
CASC4-203ENST00000429162 H3BQV1 296 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 RPS8P62241 208 aaKnown RBP23.29■■□□□ 1.32
CASC4-203ENST00000429162 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 FERMT3Q86UX7 667 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 DDX11Q96FC9 970 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 ANKRD2Q9GZV1 360 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 NBPF3Q9H094 633 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 GYG1P46976 350 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 ANTXR2P58335 489 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 CCT2P78371 535 aaKnown RBP23.29■■□□□ 1.32
CASC4-203ENST00000429162 FAM196AQ6ZSG2 479 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 TBC1D10CQ8IV04 446 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 NAPBQ9H115 298 aa23.29■■□□□ 1.32
CASC4-203ENST00000429162 SALL1Q9NSC2 1324 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 SYCE3A1L190 88 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 CTDNEP1O95476 244 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 ARMT1Q9H993 441 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 COL1A1P02452 1464 aaPredicted RBP23.28■■□□□ 1.32
CASC4-203ENST00000429162 ELP1O95163 1332 aa23.28■■□□□ 1.32
CASC4-203ENST00000429162 NAA16Q6N069 864 aaPredicted RBP23.27■■□□□ 1.32
CASC4-203ENST00000429162 IFNL3Q8IZI9 196 aa23.27■■□□□ 1.32
CASC4-203ENST00000429162 DENND2AQ9ULE3 1009 aa23.27■■□□□ 1.32
CASC4-203ENST00000429162 SEMA3EO15041 775 aa23.27■■□□□ 1.32
CASC4-203ENST00000429162 NPHP1O15259 732 aa23.27■■□□□ 1.32
CASC4-203ENST00000429162 NASPP49321 788 aaPredicted RBP23.27■■□□□ 1.32
CASC4-203ENST00000429162 NACAP1Q9BZK3 213 aa23.27■■□□□ 1.32
CASC4-203ENST00000429162 ZSCAN16Q9H4T2 348 aaPredicted RBP23.27■■□□□ 1.32
CASC4-203ENST00000429162 EPB41L4AQ9HCS5 686 aaPredicted RBP23.27■■□□□ 1.32
CASC4-203ENST00000429162 KLF18A0A0U1RQI7 1052 aa23.26■■□□□ 1.31
CASC4-203ENST00000429162 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
CASC4-203ENST00000429162 DHX16O60231 1041 aaKnown RBP23.26■■□□□ 1.31
CASC4-203ENST00000429162 RESTQ13127 1097 aa23.26■■□□□ 1.31
CASC4-203ENST00000429162 CCDC183Q5T5S1 534 aa23.26■■□□□ 1.31
CASC4-203ENST00000429162 NCOA5Q9HCD5 579 aaKnown RBP23.26■■□□□ 1.31
CASC4-203ENST00000429162 CHD4Q14839 1912 aa23.26■■□□□ 1.31
CASC4-203ENST00000429162 SCAND2PQ9GZW5 306 aaPredicted RBP23.25■■□□□ 1.31
CASC4-203ENST00000429162 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
CASC4-203ENST00000429162 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
CASC4-203ENST00000429162 UBR3Q6ZT12 1888 aa23.25■■□□□ 1.31
CASC4-203ENST00000429162 PDS5AQ29RF7 1337 aaKnown RBP23.25■■□□□ 1.31
CASC4-203ENST00000429162 LCORLQ8N3X6 602 aa23.25■■□□□ 1.31
CASC4-203ENST00000429162 GPHNQ9NQX3 736 aaPredicted RBP23.25■■□□□ 1.31
CASC4-203ENST00000429162 FAM84BQ96KN1 310 aaPredicted RBP23.24■■□□□ 1.31
CASC4-203ENST00000429162 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
CASC4-203ENST00000429162 RAI14Q9P0K7 980 aa23.24■■□□□ 1.31
CASC4-203ENST00000429162 ANGEL1Q9UNK9 670 aaKnown RBP23.24■■□□□ 1.31
CASC4-203ENST00000429162 SLC4A4Q9Y6R1 1079 aa23.24■■□□□ 1.31
CASC4-203ENST00000429162 MYH13Q9UKX3 1938 aa23.24■■□□□ 1.31
CASC4-203ENST00000429162 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 CYP7A1P22680 504 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 SLC27A3Q5K4L6 730 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 TMEM87BQ96K49 555 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 CNNM2Q9H8M5 875 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 ABCF2Q9UG63 623 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 LETM1O95202 739 aaPredicted RBP23.23■■□□□ 1.31
CASC4-203ENST00000429162 TDO2P48775 406 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 NFIXQ14938 502 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 CCDC24Q8N4L8 307 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 CNBD1Q8NA66 436 aa23.23■■□□□ 1.31
CASC4-203ENST00000429162 ANP32BQ92688 251 aaKnown RBP23.23■■□□□ 1.31
CASC4-203ENST00000429162 NEDD4P46934 1319 aa23.22■■□□□ 1.31
CASC4-203ENST00000429162 CACNA1SQ13698 1873 aa23.22■■□□□ 1.31
CASC4-203ENST00000429162 MAST2Q6P0Q8 1798 aa23.22■■□□□ 1.31
CASC4-203ENST00000429162 SH2B2O14492 632 aaPredicted RBP23.22■■□□□ 1.31
CASC4-203ENST00000429162 TTC6Q86TZ1 520 aa23.22■■□□□ 1.31
CASC4-203ENST00000429162 MYH15Q9Y2K3 1946 aa23.22■■□□□ 1.31
CASC4-203ENST00000429162 TM4SF1P30408 202 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 FAM173BQ6P4H8 233 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 CYB5R4Q7L1T6 521 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 KLHL34Q8N239 644 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 HPS5Q9UPZ3 1129 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.21■■□□□ 1.31
CASC4-203ENST00000429162 B4E1Z4 1266 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 KRT23Q9C075 422 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 RBSNQ9H1K0 784 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 TSPY26PQ9H489 355 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 BRWD3Q6RI45 1802 aa23.21■■□□□ 1.31
CASC4-203ENST00000429162 MAGEB6P1A0A0J9YX57 407 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 WTIPA6NIX2 430 aaPredicted RBP23.2■■□□□ 1.3
CASC4-203ENST00000429162 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 ZBTB22O15209 634 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 PRKAB2O43741 272 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 AKNAD1Q5T1N1 836 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 KRT27Q7Z3Y8 459 aa23.2■■□□□ 1.3
CASC4-203ENST00000429162 CPLX1O14810 134 aa23.19■■□□□ 1.3
CASC4-203ENST00000429162 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
CASC4-203ENST00000429162 CCDC173Q0VFZ6 552 aa23.19■■□□□ 1.3
CASC4-203ENST00000429162 GRAPQ13588 217 aa23.19■■□□□ 1.3
CASC4-203ENST00000429162 GRAPLQ8TC17 118 aaPredicted RBP23.19■■□□□ 1.3
CASC4-203ENST00000429162 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms