RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 GPAA1O43292 621 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 MBD4O95243 580 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 ZFYP08048 801 aaPredicted RBP10.67□□□□□ -0.7
SMC6-204ENST00000428868 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
SMC6-204ENST00000428868 CYP7A1P22680 504 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 DYNLL1P63167 89 aaKnown RBP10.67□□□□□ -0.7
SMC6-204ENST00000428868 MECOMQ03112 1051 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 CCDC93Q567U6 631 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 LCORLQ8N3X6 602 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 CERS5Q8N5B7 392 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
SMC6-204ENST00000428868 ZC3H12CQ9C0D7 883 aaKnown RBP10.67□□□□□ -0.7
SMC6-204ENST00000428868 ARMT1Q9H993 441 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 PIM2Q9P1W9 311 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 SNX14Q9Y5W7 946 aa10.67□□□□□ -0.7
SMC6-204ENST00000428868 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 YDJCA8MPS7 323 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 SLC27A2O14975 620 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 PRKAB2O43741 272 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 ECE2O60344 883 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 GTF2IP78347 998 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 CREB3L3Q68CJ9 461 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 TTLL5Q6EMB2 1281 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 KIAA1211Q6ZU35 1233 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 ERICH6Q7L0X2 663 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 FBXW7Q969H0 707 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 EYA3Q99504 573 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 COA1Q9GZY4 146 aa10.66□□□□□ -0.7
SMC6-204ENST00000428868 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
SMC6-204ENST00000428868 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
SMC6-204ENST00000428868 NFKBIEO00221 500 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 CPA1P15085 419 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 PRELPP51888 382 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 RASSF7Q02833 373 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 KIAA2012Q0VF49 1180 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 DIXDC1Q155Q3 683 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 ADCK5Q3MIX3 580 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 CC2D2BQ6DHV5 1058 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 TICAM2Q86XR7 235 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 WDR66Q8TBY9 1149 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 KCNB2Q92953 911 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 STRBPQ96SI9 672 aaKnown RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 RIOK1Q9BRS2 568 aaKnown RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 FHDC1Q9C0D6 1143 aaPredicted RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
SMC6-204ENST00000428868 BCS1LQ9Y276 419 aa10.65□□□□□ -0.7
SMC6-204ENST00000428868 EPB41L2O43491 1005 aaKnown RBP10.64□□□□□ -0.71
SMC6-204ENST00000428868 LDHBP07195 334 aaKnown RBP10.64□□□□□ -0.71
SMC6-204ENST00000428868 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
SMC6-204ENST00000428868 MFSD14BQ5SR56 506 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 NKX2-3Q8TAU0 364 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 PSMD1Q99460 953 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 DSCC1Q9BVC3 393 aa10.64□□□□□ -0.71
SMC6-204ENST00000428868 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
SMC6-204ENST00000428868 POLR2AP24928 1970 aaKnown RBP10.63□□□□□ -0.71
SMC6-204ENST00000428868 MYH6P13533 1939 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 MAGEB6P1A0A0J9YX57 407 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 F8W031 263 aaPredicted RBP10.63□□□□□ -0.71
SMC6-204ENST00000428868 SMIM22K7EJ46 135 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
SMC6-204ENST00000428868 CYP21A2P08686 494 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 MCCP23508 829 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 HAND2P61296 217 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 EVX2Q03828 476 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
SMC6-204ENST00000428868 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 SDR42E1Q8WUS8 393 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 SYT17Q9BSW7 474 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 UPF3BQ9BZI7 483 aaKnown RBP10.63□□□□□ -0.71
SMC6-204ENST00000428868 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMC6-204ENST00000428868 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
SMC6-204ENST00000428868 MROH7-TTC4A0A0A0MT08 1334 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 G3V3G9 751 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 FGAP02671 866 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 ANAPC15P60006 121 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 RABEP1Q15276 862 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 DACT2Q5SW24 774 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 ZGPATQ8N5A5 531 aaKnown RBP10.62□□□□□ -0.71
SMC6-204ENST00000428868 SUPT20HQ8NEM7 779 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 IPO9Q96P70 1041 aaKnown RBP10.62□□□□□ -0.71
SMC6-204ENST00000428868 PCDHAC2Q9Y5I4 1007 aa10.62□□□□□ -0.71
SMC6-204ENST00000428868 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
SMC6-204ENST00000428868 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
SMC6-204ENST00000428868 SCNN1DP51172 638 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms