RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
CECR3-201ENST00000428828 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
CECR3-201ENST00000428828 AOC3Q16853 763 aa13.53□□□□□ -0.24
CECR3-201ENST00000428828 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
CECR3-201ENST00000428828 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
CECR3-201ENST00000428828 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
CECR3-201ENST00000428828 IRS2Q9Y4H2 1338 aa13.53□□□□□ -0.24
CECR3-201ENST00000428828 G3V3G9 751 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.24
CECR3-201ENST00000428828 RASSF7Q02833 373 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 DOK7Q18PE1 504 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 PI16Q6UXB8 463 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 PI4K2BQ8TCG2 481 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 EYA3Q99504 573 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 KIF2CQ99661 725 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 ZC3H12CQ9C0D7 883 aaKnown RBP13.52□□□□□ -0.24
CECR3-201ENST00000428828 SNRKQ9NRH2 765 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 PSME4Q14997 1843 aa13.52□□□□□ -0.24
CECR3-201ENST00000428828 ERC2O15083 957 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 PPIP5K2O43314 1243 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
CECR3-201ENST00000428828 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
CECR3-201ENST00000428828 SCARF1Q14162 830 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 DNTTIP2Q5QJE6 756 aaKnown RBP13.52□□□□□ -0.25
CECR3-201ENST00000428828 SUPT20HQ8NEM7 779 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 STAP2Q9UGK3 403 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 JAG2Q9Y219 1238 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 DOCK2Q92608 1830 aa13.52□□□□□ -0.25
CECR3-201ENST00000428828 NFKBIEO00221 500 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 ZNF646O15015 1829 aaPredicted RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 COL1A1P02452 1464 aaPredicted RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 COL4A5P29400 1685 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 CAVIN1Q6NZI2 390 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 TEX2Q8IWB9 1127 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 ARID3AQ99856 593 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 RTFDC1Q9BY42 306 aaPredicted RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 CTIFO43310 598 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 MCAMP43121 646 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 PSMD1Q99460 953 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 OSBPL3Q9H4L5 887 aa13.51□□□□□ -0.25
CECR3-201ENST00000428828 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
CECR3-201ENST00000428828 AOX1Q06278 1338 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
CECR3-201ENST00000428828 MBD3O95983 291 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 ATP5JP18859 108 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
CECR3-201ENST00000428828 CHAF1AQ13111 956 aaPredicted RBP13.5□□□□□ -0.25
CECR3-201ENST00000428828 NOLC1Q14978 699 aaKnown RBP eCLIP13.5□□□□□ -0.25
CECR3-201ENST00000428828 GPR162Q16538 588 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 FBXO33Q7Z6M2 555 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
CECR3-201ENST00000428828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
CECR3-201ENST00000428828 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
CECR3-201ENST00000428828 C15orf52Q6ZUT6 534 aaKnown RBP13.49□□□□□ -0.25
CECR3-201ENST00000428828 FAM184AQ8NB25 1140 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 TULP2O00295 520 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 GOLIM4O00461 696 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 ECE2O60344 883 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
CECR3-201ENST00000428828 ZAP70P43403 619 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 SPATA5Q8NB90 893 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 CD209Q9NNX6 404 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
CECR3-201ENST00000428828 ZNF771Q7L3S4 317 aaPredicted RBP13.48□□□□□ -0.25
CECR3-201ENST00000428828 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
CECR3-201ENST00000428828 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
CECR3-201ENST00000428828 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 HAUS7Q99871 368 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 SDSP20132 328 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 PRELPP51888 382 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
CECR3-201ENST00000428828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
CECR3-201ENST00000428828 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
CECR3-201ENST00000428828 KCNQ5Q9NR82 932 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms