RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DCPSQ96C86 337 aaKnown RBP17.76■□□□□ 0.43
SGCE-204ENST00000428696 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
SGCE-204ENST00000428696 ASTN2O75129 1339 aaPredicted RBP17.75■□□□□ 0.43
SGCE-204ENST00000428696 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
SGCE-204ENST00000428696 CRKP46108 304 aa17.75■□□□□ 0.43
SGCE-204ENST00000428696 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
SGCE-204ENST00000428696 TEKT1Q969V4 418 aa17.75■□□□□ 0.43
SGCE-204ENST00000428696 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
SGCE-204ENST00000428696 SCAF8Q9UPN6 1271 aaKnown RBP17.75■□□□□ 0.43
SGCE-204ENST00000428696 COL1A1P02452 1464 aaPredicted RBP17.75■□□□□ 0.43
SGCE-204ENST00000428696 MYO1BO43795 1136 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
SGCE-204ENST00000428696 DIXDC1Q155Q3 683 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 ANGEL2Q5VTE6 544 aaKnown RBP17.74■□□□□ 0.43
SGCE-204ENST00000428696 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 CNTROBQ8N137 903 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 RBM46Q8TBY0 533 aaKnown RBP17.74■□□□□ 0.43
SGCE-204ENST00000428696 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
SGCE-204ENST00000428696 SUGT1Q9Y2Z0 365 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 MAST3O60307 1309 aa17.74■□□□□ 0.43
SGCE-204ENST00000428696 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 GOLIM4O00461 696 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
SGCE-204ENST00000428696 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
SGCE-204ENST00000428696 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 PRMT6Q96LA8 375 aaPredicted RBP17.73■□□□□ 0.43
SGCE-204ENST00000428696 GGA3Q9NZ52 723 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 SERPINA10Q9UK55 444 aa17.73■□□□□ 0.43
SGCE-204ENST00000428696 WNT10BO00744 389 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 ATP5JP18859 108 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 MMP14P50281 582 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 MECOMQ03112 1051 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 SCN4AP35499 1836 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 NUCB1Q02818 461 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 SULF1Q8IWU6 871 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
SGCE-204ENST00000428696 ZC3H15Q8WU90 426 aaKnown RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 GLIS2Q9BZE0 524 aaPredicted RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
SGCE-204ENST00000428696 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 SPDYE6P0CI01 402 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 MX1P20591 662 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 GSTO1P78417 241 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 KRT26Q7Z3Y9 468 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 ZNF408Q9H9D4 720 aa17.71■□□□□ 0.43
SGCE-204ENST00000428696 TRAF5O00463 557 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 ERC2O15083 957 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 C1QTNF8P60827 252 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 FSTL1Q12841 308 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 MAP3K12Q12852 859 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
SGCE-204ENST00000428696 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
SGCE-204ENST00000428696 DLK2Q6UY11 383 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 CDC37L1Q7L3B6 337 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 PAG1Q9NWQ8 432 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
SGCE-204ENST00000428696 ADM5C9JUS6 153 aa17.69■□□□□ 0.42
SGCE-204ENST00000428696 LDHCP07864 332 aa17.69■□□□□ 0.42
SGCE-204ENST00000428696 HDLBPQ00341 1268 aaKnown RBP17.69■□□□□ 0.42
SGCE-204ENST00000428696 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
SGCE-204ENST00000428696 HAUS7Q99871 368 aa17.69■□□□□ 0.42
SGCE-204ENST00000428696 NOL10Q9BSC4 688 aaKnown RBP17.69■□□□□ 0.42
SGCE-204ENST00000428696 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 CYP7A1P22680 504 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 CACNB3P54284 484 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 FMR1Q06787 632 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGCE-204ENST00000428696 HHIPL2Q6UWX4 724 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 MTMR14Q8NCE2 650 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGCE-204ENST00000428696 MRIQ9BWK5 157 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 ZNF70Q9UC06 446 aaPredicted RBP17.68■□□□□ 0.42
SGCE-204ENST00000428696 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
SGCE-204ENST00000428696 PSME4Q14997 1843 aa17.67■□□□□ 0.42
SGCE-204ENST00000428696 GLRX3O76003 335 aaKnown RBP17.67■□□□□ 0.42
SGCE-204ENST00000428696 PRAMEF18Q5VWM3 479 aa17.67■□□□□ 0.42
SGCE-204ENST00000428696 NSUN4Q96CB9 384 aaKnown RBP17.67■□□□□ 0.42
SGCE-204ENST00000428696 PGAP2Q9UHJ9 254 aa17.67■□□□□ 0.42
SGCE-204ENST00000428696 AOX1Q06278 1338 aa17.67■□□□□ 0.42
SGCE-204ENST00000428696 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
SGCE-204ENST00000428696 ZBTB22O15209 634 aa17.66■□□□□ 0.42
SGCE-204ENST00000428696 BTDP43251 543 aa17.66■□□□□ 0.42
SGCE-204ENST00000428696 PDE1AP54750 535 aa17.66■□□□□ 0.42
SGCE-204ENST00000428696 SLC9C2Q5TAH2 1124 aa17.66■□□□□ 0.42
SGCE-204ENST00000428696 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
SGCE-204ENST00000428696 MYH13Q9UKX3 1938 aa17.65■□□□□ 0.42
SGCE-204ENST00000428696 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
SGCE-204ENST00000428696 CENPQQ7L2Z9 268 aaPredicted RBP17.65■□□□□ 0.42
SGCE-204ENST00000428696 APOBEC3FQ8IUX4 373 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms