RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
PEX1-203ENST00000428214 SLC15A2Q16348 729 aa13.29□□□□□ -0.28
PEX1-203ENST00000428214 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
PEX1-203ENST00000428214 GZF1Q9H116 711 aaPredicted RBP13.29□□□□□ -0.28
PEX1-203ENST00000428214 GSG1L2A8MUP6 293 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 ANTXR2P58335 489 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
PEX1-203ENST00000428214 DIXDC1Q155Q3 683 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 NEDD4P46934 1319 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
PEX1-203ENST00000428214 SRGNP10124 158 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 MECOMQ03112 1051 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 KCNQ5Q9NR82 932 aa13.28□□□□□ -0.28
PEX1-203ENST00000428214 FOSBP53539 338 aa13.27□□□□□ -0.28
PEX1-203ENST00000428214 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.28
PEX1-203ENST00000428214 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.28
PEX1-203ENST00000428214 RXRAP19793 462 aa13.27□□□□□ -0.29
PEX1-203ENST00000428214 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
PEX1-203ENST00000428214 AATFQ9NY61 560 aaKnown RBP eCLIP13.27□□□□□ -0.29
PEX1-203ENST00000428214 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
PEX1-203ENST00000428214 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
PEX1-203ENST00000428214 IFNL3Q8IZI9 196 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 SLC4A4Q9Y6R1 1079 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 NRXN2Q9P2S2 1712 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 PCNTO95613 3336 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 GJB2P29033 226 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
PEX1-203ENST00000428214 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.29
PEX1-203ENST00000428214 NSUN4Q96CB9 384 aaKnown RBP13.26□□□□□ -0.29
PEX1-203ENST00000428214 RIOK1Q9BRS2 568 aaKnown RBP13.26□□□□□ -0.29
PEX1-203ENST00000428214 XDHP47989 1333 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 B4E1Z4 1266 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 SLX4Q8IY92 1834 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 LTBP1Q14766 1721 aa13.26□□□□□ -0.29
PEX1-203ENST00000428214 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
PEX1-203ENST00000428214 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 KDM4AO75164 1064 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 BAG4O95429 457 aaKnown RBP13.25□□□□□ -0.29
PEX1-203ENST00000428214 SCRN1Q12765 414 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
PEX1-203ENST00000428214 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
PEX1-203ENST00000428214 PSMA5P28066 241 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 BRPF3Q9ULD4 1205 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 ZNF213O14771 459 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 HOXA10P31260 410 aaPredicted RBP13.25□□□□□ -0.29
PEX1-203ENST00000428214 MCM2P49736 904 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
PEX1-203ENST00000428214 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 SYT1P21579 422 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
PEX1-203ENST00000428214 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 BRIP1Q9BX63 1249 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 PRDM1O75626 825 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 CYP2D6P10635 497 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
PEX1-203ENST00000428214 MB21D2Q8IYB1 491 aaPredicted RBP13.24□□□□□ -0.29
PEX1-203ENST00000428214 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
PEX1-203ENST00000428214 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
PEX1-203ENST00000428214 ADAMTSL1Q8N6G6 1762 aa13.24□□□□□ -0.29
PEX1-203ENST00000428214 FGD1P98174 961 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
PEX1-203ENST00000428214 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 GNL3LQ9NVN8 582 aaKnown RBP13.23□□□□□ -0.29
PEX1-203ENST00000428214 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
PEX1-203ENST00000428214 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
PEX1-203ENST00000428214 PRC1O43663 620 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 BRD1O95696 1058 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 CHMP4CQ96CF2 233 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 INTS4Q96HW7 963 aaKnown RBP13.23□□□□□ -0.29
PEX1-203ENST00000428214 NAPBQ9H115 298 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
PEX1-203ENST00000428214 TDO2P48775 406 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 TDRD7Q8NHU6 1098 aaKnown RBP13.22□□□□□ -0.29
PEX1-203ENST00000428214 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 LRRC37AA6NMS7 1700 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 MYH2Q9UKX2 1941 aa13.22□□□□□ -0.29
PEX1-203ENST00000428214 KRT32Q14532 448 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms