RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 CA12O43570 354 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 PLIN1O60240 522 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 HMMRO75330 724 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
SMC1A-203ENST00000428014 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
SMC1A-203ENST00000428014 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
SMC1A-203ENST00000428014 GLIS2Q9BZE0 524 aaPredicted RBP11.29□□□□□ -0.6
SMC1A-203ENST00000428014 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
SMC1A-203ENST00000428014 PNMA6EA0A0J9YXQ4 647 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 ARID4AP29374 1257 aaPredicted RBP11.28□□□□□ -0.6
SMC1A-203ENST00000428014 NF2P35240 595 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 BCAMP50895 628 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 NOGQ13253 232 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
SMC1A-203ENST00000428014 CEP85Q6P2H3 762 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 FAM83AQ86UY5 434 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
SMC1A-203ENST00000428014 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
SMC1A-203ENST00000428014 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SMC1A-203ENST00000428014 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
SMC1A-203ENST00000428014 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
SMC1A-203ENST00000428014 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 NBPF9Q3BBW0 867 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
SMC1A-203ENST00000428014 CCDC102BQ68D86 513 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
SMC1A-203ENST00000428014 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
SMC1A-203ENST00000428014 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
SMC1A-203ENST00000428014 TRAF5O00463 557 aa11.26□□□□□ -0.61
SMC1A-203ENST00000428014 TNNI2P48788 182 aa11.26□□□□□ -0.61
SMC1A-203ENST00000428014 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
SMC1A-203ENST00000428014 SIL1Q9H173 461 aa11.26□□□□□ -0.61
SMC1A-203ENST00000428014 ABT1Q9ULW3 272 aaKnown RBP11.26□□□□□ -0.61
SMC1A-203ENST00000428014 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
SMC1A-203ENST00000428014 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 CRKP46108 304 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 VEGFBP49765 207 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 TFCP2Q12800 502 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
SMC1A-203ENST00000428014 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 PRMT6Q96LA8 375 aaPredicted RBP11.25□□□□□ -0.61
SMC1A-203ENST00000428014 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 GAKO14976 1311 aa11.25□□□□□ -0.61
SMC1A-203ENST00000428014 LAMB1P07942 1786 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
SMC1A-203ENST00000428014 HUNKP57058 714 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMC1A-203ENST00000428014 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 MXD3Q9BW11 206 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 SAGE1Q9NXZ1 904 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 PCNTO95613 3336 aa11.24□□□□□ -0.61
SMC1A-203ENST00000428014 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 SLC10A3P09131 477 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 PHKA1P46020 1223 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 TIMM10P62072 90 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 GSE1Q14687 1217 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 ARMC9Q7Z3E5 817 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 TMOD2Q9NZR1 351 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 ZNF70Q9UC06 446 aaPredicted RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
SMC1A-203ENST00000428014 COL2A1P02458 1487 aaPredicted RBP11.23□□□□□ -0.61
SMC1A-203ENST00000428014 LDHCP07864 332 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 ZBTB48P10074 688 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-203ENST00000428014 INHBEP58166 350 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 GSTO1P78417 241 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 HTRA3P83110 453 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 CFHR5Q9BXR6 569 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 MKRN1Q9UHC7 482 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms