RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SUPT20HL1Q3ZLR7 823 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 MOB2Q70IA6 237 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 DENND2AQ9ULE3 1009 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 SUGT1Q9Y2Z0 365 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 MYH13Q9UKX3 1938 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 PAPPA2Q9BXP8 1791 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 COL1A1P02452 1464 aaPredicted RBP25.55■■□□□ 1.68
HSPG2-205ENST00000427897 PNMA6EA0A0J9YXQ4 647 aa25.55■■□□□ 1.68
HSPG2-205ENST00000427897 PPP1R12BO60237 982 aaPredicted RBP25.55■■□□□ 1.68
HSPG2-205ENST00000427897 TNNI2P48788 182 aa25.55■■□□□ 1.68
HSPG2-205ENST00000427897 HDLBPQ00341 1268 aaKnown RBP25.55■■□□□ 1.68
HSPG2-205ENST00000427897 IFFO2Q5TF58 517 aa25.55■■□□□ 1.68
HSPG2-205ENST00000427897 PRDM10Q9NQV6 1147 aa25.55■■□□□ 1.68
HSPG2-205ENST00000427897 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.55■■□□□ 1.68
HSPG2-205ENST00000427897 ZNF70Q9UC06 446 aaPredicted RBP25.55■■□□□ 1.68
HSPG2-205ENST00000427897 ARAP2Q8WZ64 1704 aa25.54■■□□□ 1.68
HSPG2-205ENST00000427897 CA12O43570 354 aa25.54■■□□□ 1.68
HSPG2-205ENST00000427897 KIF23Q02241 960 aaPredicted RBP25.54■■□□□ 1.68
HSPG2-205ENST00000427897 C1orf115Q9H7X2 142 aa25.54■■□□□ 1.68
HSPG2-205ENST00000427897 TMOD2Q9NZR1 351 aa25.54■■□□□ 1.68
HSPG2-205ENST00000427897 ANGEL1Q9UNK9 670 aaKnown RBP25.54■■□□□ 1.68
HSPG2-205ENST00000427897 THSD7BQ9C0I4 1608 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 A0A1B0GUL7 405 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 SEMA3EO15041 775 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 PHKA1P46020 1223 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 RASA3Q14644 834 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 GRIK5Q16478 980 aa25.53■■□□□ 1.68
HSPG2-205ENST00000427897 FAM155AB1AL88 458 aaPredicted RBP25.52■■□□□ 1.68
HSPG2-205ENST00000427897 TCP10L2B9ZVM9 353 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 ZBTB7BO15156 539 aaPredicted RBP25.52■■□□□ 1.68
HSPG2-205ENST00000427897 SLC10A3P09131 477 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 HSPA8P11142 646 aaKnown RBP25.52■■□□□ 1.68
HSPG2-205ENST00000427897 RLBP1P12271 317 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 ATP8B2P98198 1209 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 MVPQ14764 893 aaKnown RBP25.52■■□□□ 1.68
HSPG2-205ENST00000427897 SPDYE2Q495Y8 402 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 CCDC102BQ68D86 513 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 PANK1Q8TE04 598 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 RCAN3Q9UKA8 241 aa25.52■■□□□ 1.68
HSPG2-205ENST00000427897 LDHBP07195 334 aaKnown RBP25.51■■□□□ 1.67
HSPG2-205ENST00000427897 ADORA1P30542 326 aa25.51■■□□□ 1.67
HSPG2-205ENST00000427897 ZGPATQ8N5A5 531 aaKnown RBP25.51■■□□□ 1.67
HSPG2-205ENST00000427897 XAGE2Q96GT9 111 aa25.51■■□□□ 1.67
HSPG2-205ENST00000427897 MRIQ9BWK5 157 aa25.51■■□□□ 1.67
HSPG2-205ENST00000427897 RASAL3Q86YV0 1011 aa25.5■■□□□ 1.67
HSPG2-205ENST00000427897 ZIC5Q96T25 663 aa25.5■■□□□ 1.67
HSPG2-205ENST00000427897 TSKSQ9UJT2 592 aa25.5■■□□□ 1.67
HSPG2-205ENST00000427897 SURF6O75683 361 aaKnown RBP25.49■■□□□ 1.67
HSPG2-205ENST00000427897 REM2Q8IYK8 340 aaPredicted RBP25.49■■□□□ 1.67
HSPG2-205ENST00000427897 ZDHHC15Q96MV8 337 aa25.49■■□□□ 1.67
HSPG2-205ENST00000427897 AOX1Q06278 1338 aa25.48■■□□□ 1.67
HSPG2-205ENST00000427897 NBPF12Q5TAG4 269 aaPredicted RBP25.48■■□□□ 1.67
HSPG2-205ENST00000427897 HHIPL2Q6UWX4 724 aa25.48■■□□□ 1.67
HSPG2-205ENST00000427897 SLC10A4Q96EP9 437 aa25.48■■□□□ 1.67
HSPG2-205ENST00000427897 ABCF2Q9UG63 623 aa25.48■■□□□ 1.67
HSPG2-205ENST00000427897 IREB2P48200 963 aaKnown RBP25.47■■□□□ 1.67
HSPG2-205ENST00000427897 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.47■■□□□ 1.67
HSPG2-205ENST00000427897 SSH3Q8TE77 659 aa25.47■■□□□ 1.67
HSPG2-205ENST00000427897 MKRN3Q13064 507 aaKnown RBP25.46■■□□□ 1.67
HSPG2-205ENST00000427897 POLA2Q14181 598 aa25.46■■□□□ 1.67
HSPG2-205ENST00000427897 SPTY2D1Q68D10 685 aaPredicted RBP25.46■■□□□ 1.67
HSPG2-205ENST00000427897 CHMP4BQ9H444 224 aaKnown RBP25.46■■□□□ 1.67
HSPG2-205ENST00000427897 FZD1Q9UP38 647 aa25.46■■□□□ 1.67
HSPG2-205ENST00000427897 PRDX5P30044 214 aa25.45■■□□□ 1.66
HSPG2-205ENST00000427897 DZIP1Q86YF9 867 aaKnown RBP25.45■■□□□ 1.66
HSPG2-205ENST00000427897 SLF2Q8IX21 1173 aa25.45■■□□□ 1.66
HSPG2-205ENST00000427897 SALL1Q9NSC2 1324 aa25.44■■□□□ 1.66
HSPG2-205ENST00000427897 CACNB3P54284 484 aa25.44■■□□□ 1.66
HSPG2-205ENST00000427897 CSRNP1Q96S65 589 aa25.44■■□□□ 1.66
HSPG2-205ENST00000427897 DDX19BQ9UMR2 479 aa25.44■■□□□ 1.66
HSPG2-205ENST00000427897 TRPA1O75762 1119 aa25.43■■□□□ 1.66
HSPG2-205ENST00000427897 RASGRF1Q13972 1273 aa25.43■■□□□ 1.66
HSPG2-205ENST00000427897 TMEM39BQ9GZU3 492 aa25.43■■□□□ 1.66
HSPG2-205ENST00000427897 COG6Q9Y2V7 657 aa25.43■■□□□ 1.66
HSPG2-205ENST00000427897 UQCRFS1P1P0C7P4 283 aa25.42■■□□□ 1.66
HSPG2-205ENST00000427897 DIXDC1Q155Q3 683 aa25.42■■□□□ 1.66
HSPG2-205ENST00000427897 CCDC158Q5M9N0 1113 aa25.42■■□□□ 1.66
HSPG2-205ENST00000427897 LDLRAD1Q5T700 205 aa25.42■■□□□ 1.66
HSPG2-205ENST00000427897 APOBEC3HQ6NTF7 200 aaKnown RBP25.42■■□□□ 1.66
HSPG2-205ENST00000427897 HOOK2Q96ED9 719 aa25.42■■□□□ 1.66
HSPG2-205ENST00000427897 MAP3K11Q16584 847 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 TTC39AQ5SRH9 613 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 ERICH6Q7L0X2 663 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 ANKRD13AQ8IZ07 590 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 GPR108Q9NPR9 543 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.41■■□□□ 1.66
HSPG2-205ENST00000427897 AKAP11Q9UKA4 1901 aa25.41■■□□□ 1.66
HSPG2-205ENST00000427897 UNCXA6NJT0 531 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 USP2O75604 605 aaPredicted RBP25.4■■□□□ 1.66
HSPG2-205ENST00000427897 CAPN15O75808 1086 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 SREBF2Q12772 1141 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 TNNI3KQ59H18 835 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 CEP85Q6P2H3 762 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 FAM83AQ86UY5 434 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 USP40Q9NVE5 1235 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 RNF186Q9NXI6 227 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 SAGE1Q9NXZ1 904 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 DAGLAQ9Y4D2 1042 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 FPGT-TNNI3KV9GXZ4 949 aa25.4■■□□□ 1.66
HSPG2-205ENST00000427897 PDS5AQ29RF7 1337 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms