RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 CLEC4MQ9H2X3 399 aaPredicted RBP6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 STRN4Q9NRL3 753 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NDFIP2Q9NV92 336 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 AVPP01185 164 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 BMP6P22004 513 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NME2P22392 152 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 BHMTQ93088 406 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 HHIPQ96QV1 700 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 DNMT3LQ9UJW3 386 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 MAPK8IP1Q9UQF2 711 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 LOC102724428A0A0B4J2F2 783 aa6.44□□□□□ -1.38
NUDCD1-202ENST00000427660 SIK1P57059 783 aa6.44□□□□□ -1.38
NUDCD1-202ENST00000427660 BSNDQ8WZ55 320 aa6.44□□□□□ -1.38
NUDCD1-202ENST00000427660 PCDHB5Q9Y5E4 795 aa6.44□□□□□ -1.38
NUDCD1-202ENST00000427660 BPNT1O95861 308 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 FAM182BQ5T319 152 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 FBXW10Q5XX13 1052 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 JMYQ8N9B5 988 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 C19orf47Q8N9M1 422 aaKnown RBP6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 JARID2Q92833 1246 aaPredicted RBP6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 FEZ1Q99689 392 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 BNIP3LO60238 219 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 B3GALT4O96024 378 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 RIPOR1Q6ZS17 1223 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 TRIM46Q7Z4K8 759 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 LSRQ86X29 649 aaPredicted RBP6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 ZNF669Q96BR6 464 aaPredicted RBP6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 PLD4Q96BZ4 506 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 SLC30A3Q99726 388 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 EMILIN2Q9BXX0 1053 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 RASSF4Q9H2L5 321 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 KANSL2Q9H9L4 492 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 BRMS1Q9HCU9 246 aa6.43□□□□□ -1.38
NUDCD1-202ENST00000427660 BMP1P13497 986 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 C2orf27AQ580R0 203 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 SYNPOQ8N3V7 929 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 THAP3Q8WTV1 239 aaPredicted RBP6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 ZFP42Q96MM3 310 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 MUC3BQ9H195 1237 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 ST7Q9NRC1 585 aa6.42□□□□□ -1.38
NUDCD1-202ENST00000427660 SMNDC1O75940 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 TRIM37O94972 964 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 ATE1O95260 518 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 GHRHP01286 108 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 CCDC181Q5TID7 509 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 GK5Q6ZS86 529 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 HCN2Q9UL51 889 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 ATXN7L1Q9ULK2 861 aaPredicted RBP6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 ARNTP27540 789 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 GYS2P54840 703 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 CLCQ05315 142 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 PCDH1Q08174 1060 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 SEPT6Q14141 434 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 MTERF2Q49AM1 385 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 RASIP1Q5U651 963 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 SULF2Q8IWU5 870 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 ST13P5Q8NFI4 369 aaPredicted RBP6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 POP1Q99575 1024 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 KLHL42Q9P2K6 505 aa6.41□□□□□ -1.38
NUDCD1-202ENST00000427660 ZBTB42B2RXF5 422 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 ATP11AP98196 1134 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 SQSTM1Q13501 440 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 LARP1BQ659C4 914 aaKnown RBP6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 RPUSD2Q8IZ73 545 aaKnown RBP6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 GAL3ST3Q96A11 431 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 TNKS2Q9H2K2 1166 aa6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 TYW1Q9NV66 732 aaKnown RBP6.4□□□□□ -1.38
NUDCD1-202ENST00000427660 LRRFIP1Q32MZ4 808 aaKnown RBP6.4□□□□□ -1.39
NUDCD1-202ENST00000427660 DDX54Q8TDD1 881 aaKnown RBP6.4□□□□□ -1.39
NUDCD1-202ENST00000427660 SLC35F4A4IF30 521 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 J3QW42 95 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 MAN1A2O60476 641 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 GJB6O95452 261 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 CD33P20138 364 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 ZNF157P51786 506 aaPredicted RBP6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 AMPD3Q01432 767 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 ZNF252P-AS1Q0IIN9 211 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 TCEA2Q15560 299 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 RAB44Q7Z6P3 723 aaPredicted RBP6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 TRERF1Q96PN7 1200 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 PHF24Q9UPV7 400 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 PCDHB14Q9Y5E9 798 aa6.39□□□□□ -1.39
NUDCD1-202ENST00000427660 MEIS3P2A8K0S8 358 aa6.38□□□□□ -1.39
NUDCD1-202ENST00000427660 VIL1P09327 827 aaKnown RBP6.38□□□□□ -1.39
NUDCD1-202ENST00000427660 ZNF423Q2M1K9 1284 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms