RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 GLYCTKQ8IVS8 523 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 C12orf50Q8NA57 414 aaPredicted RBP9.6□□□□□ -0.87
C9orf3-205ENST00000427193 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 KRTAP9-2Q9BYQ4 174 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
C9orf3-205ENST00000427193 METTL12A8MUP2 240 aa9.59□□□□□ -0.87
C9orf3-205ENST00000427193 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
C9orf3-205ENST00000427193 GSTM4Q03013 218 aa9.59□□□□□ -0.87
C9orf3-205ENST00000427193 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
C9orf3-205ENST00000427193 CFTRP13569 1480 aa9.59□□□□□ -0.87
C9orf3-205ENST00000427193 A0A096LPE4 126 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 A0A1W2PP55 124 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 A0A1W2PPZ6 126 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-205ENST00000427193 SPINK2P20155 84 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 SGO2Q562F6 1265 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 CLEC4MQ9H2X3 399 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-205ENST00000427193 LIN7BQ9HAP6 207 aa9.58□□□□□ -0.88
C9orf3-205ENST00000427193 NDUFB5O43674 189 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 DLGAP3O95886 979 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 SERPINB4P48594 390 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 ECM1Q16610 540 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 MCTP1Q6DN14 999 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 GIMAP7Q8NHV1 300 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 TCF12Q99081 682 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 NRSN2Q9GZP1 204 aa9.57□□□□□ -0.88
C9orf3-205ENST00000427193 WIZO95785 1651 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 RXRBP28702 533 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 PCDH1Q08174 1060 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 DTX1Q86Y01 620 aa9.56□□□□□ -0.88
C9orf3-205ENST00000427193 WDR64B1ANS9 1081 aa9.55□□□□□ -0.88
C9orf3-205ENST00000427193 GRIA4P48058 902 aa9.55□□□□□ -0.88
C9orf3-205ENST00000427193 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
C9orf3-205ENST00000427193 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
C9orf3-205ENST00000427193 MFSD14AQ96MC6 490 aa9.55□□□□□ -0.88
C9orf3-205ENST00000427193 CITED4Q96RK1 184 aa9.55□□□□□ -0.88
C9orf3-205ENST00000427193 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
C9orf3-205ENST00000427193 CYP11A1P05108 521 aa9.54□□□□□ -0.88
C9orf3-205ENST00000427193 GP2P55259 537 aaKnown RBP9.54□□□□□ -0.88
C9orf3-205ENST00000427193 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
C9orf3-205ENST00000427193 KIAA0319Q5VV43 1072 aa9.54□□□□□ -0.88
C9orf3-205ENST00000427193 FAM129BQ96TA1 746 aa9.54□□□□□ -0.88
C9orf3-205ENST00000427193 ZFYVE1Q9HBF4 777 aa9.54□□□□□ -0.88
C9orf3-205ENST00000427193 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-205ENST00000427193 FAM95CA0A1B0GW59 222 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 DRD2P14416 443 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 USP11P51784 963 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 SOX4Q06945 474 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-205ENST00000427193 ZNF423Q2M1K9 1284 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 SPRED3Q2MJR0 410 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 C2CD4AQ8NCU7 369 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-205ENST00000427193 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
C9orf3-205ENST00000427193 YIPF2Q9BWQ6 316 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 ATG3Q9NT62 314 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
C9orf3-205ENST00000427193 TOP2AP11388 1531 aaKnown RBP9.52□□□□□ -0.88
C9orf3-205ENST00000427193 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
C9orf3-205ENST00000427193 IRAK1P51617 712 aa9.52□□□□□ -0.89
C9orf3-205ENST00000427193 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.89
C9orf3-205ENST00000427193 PAOXQ6QHF9 649 aa9.52□□□□□ -0.89
C9orf3-205ENST00000427193 OAS3Q9Y6K5 1087 aaKnown RBP9.52□□□□□ -0.89
C9orf3-205ENST00000427193 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
C9orf3-205ENST00000427193 MAOBP27338 520 aa9.51□□□□□ -0.89
C9orf3-205ENST00000427193 POU4F3Q15319 338 aa9.51□□□□□ -0.89
C9orf3-205ENST00000427193 CDPF1Q6NVV7 123 aa9.51□□□□□ -0.89
C9orf3-205ENST00000427193 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
C9orf3-205ENST00000427193 EZH1Q92800 747 aaPredicted RBP9.51□□□□□ -0.89
C9orf3-205ENST00000427193 WNT11O96014 354 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 B3GALT4O96024 378 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 F13BP05160 661 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 ADH5P11766 374 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 ITPKAP23677 461 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 PDE4CQ08493 712 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 ORC1Q13415 861 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 NFKBIBQ15653 356 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 FBXL6Q8N531 539 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 FBLIM1Q8WUP2 373 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
C9orf3-205ENST00000427193 OSBPL1AQ9BXW6 950 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 EHD4Q9H223 541 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 NPHS2Q9NP85 383 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
C9orf3-205ENST00000427193 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
C9orf3-205ENST00000427193 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
C9orf3-205ENST00000427193 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
C9orf3-205ENST00000427193 CORO1BQ9BR76 489 aa9.48□□□□□ -0.89
C9orf3-205ENST00000427193 CTSBP07858 339 aa9.47□□□□□ -0.89
C9orf3-205ENST00000427193 FOSL1P15407 271 aa9.47□□□□□ -0.89
C9orf3-205ENST00000427193 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
C9orf3-205ENST00000427193 ACTL7BQ9Y614 415 aa9.47□□□□□ -0.89
C9orf3-205ENST00000427193 CHD1O14646 1710 aa9.46□□□□□ -0.89
C9orf3-205ENST00000427193 PAX4O43316 350 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 IGHA2P01877 340 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
C9orf3-205ENST00000427193 ZAR1Q86SH2 424 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms