RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LY75O60449 1722 aa15.61■□□□□ 0.09
USP42-203ENST00000426246 EIF5P55010 431 aaKnown RBP15.61■□□□□ 0.09
USP42-203ENST00000426246 DENND2AQ9ULE3 1009 aa15.61■□□□□ 0.09
USP42-203ENST00000426246 USP27XA6NNY8 438 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 TRDNQ13061 729 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 STOX1Q6ZVD7 989 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 ZSWIM4Q9H7M6 989 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 hCG_1642624A0A1W2PR95 340 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 PES1O00541 588 aaKnown RBP15.6■□□□□ 0.09
USP42-203ENST00000426246 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
USP42-203ENST00000426246 ONECUT3O60422 494 aaPredicted RBP15.59■□□□□ 0.09
USP42-203ENST00000426246 METTL24Q5JXM2 366 aa15.59■□□□□ 0.09
USP42-203ENST00000426246 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
USP42-203ENST00000426246 GOLGB1Q14789 3259 aaKnown RBP15.59■□□□□ 0.09
USP42-203ENST00000426246 DDX19AQ9NUU7 478 aaKnown RBP15.59■□□□□ 0.09
USP42-203ENST00000426246 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
USP42-203ENST00000426246 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
USP42-203ENST00000426246 SERPINC1P01008 464 aa15.58■□□□□ 0.09
USP42-203ENST00000426246 CRKLP46109 303 aaKnown RBP15.58■□□□□ 0.09
USP42-203ENST00000426246 GTF3C6Q969F1 213 aa15.58■□□□□ 0.09
USP42-203ENST00000426246 CDK11BP21127 795 aaKnown RBP15.58■□□□□ 0.08
USP42-203ENST00000426246 ZNF75DP51815 510 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 KRT32Q14532 448 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 PTPN14Q15678 1187 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 KIF6Q6ZMV9 814 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 KIAA1524Q8TCG1 905 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 KLHL10Q6JEL2 608 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 ZSCAN25Q6NSZ9 544 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
USP42-203ENST00000426246 CPLX3Q8WVH0 158 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 DDX60Q8IY21 1712 aaKnown RBP15.58■□□□□ 0.08
USP42-203ENST00000426246 UBN2Q6ZU65 1347 aa15.58■□□□□ 0.08
USP42-203ENST00000426246 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 SKIDA1Q1XH10 827 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 NLRP10Q86W26 655 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 IFNKQ9P0W0 207 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 TBC1D2BQ9UPU7 963 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 PCCAP05165 728 aaPredicted RBP15.57■□□□□ 0.08
USP42-203ENST00000426246 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
USP42-203ENST00000426246 DHX32Q7L7V1 743 aaKnown RBP15.57■□□□□ 0.08
USP42-203ENST00000426246 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
USP42-203ENST00000426246 E7EWF7 191 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 CFAP100Q494V2 611 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 LDHAL6AQ6ZMR3 332 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 CEP57L1Q8IYX8 460 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 ZBTB38Q8NAP3 1195 aaPredicted RBP15.57■□□□□ 0.08
USP42-203ENST00000426246 MAP7D2Q96T17 732 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 LAMB2P55268 1798 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 AFF2P51816 1311 aa15.57■□□□□ 0.08
USP42-203ENST00000426246 COBLO75128 1261 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 GOLPH3LQ9H4A5 285 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CLSTN2Q9H4D0 955 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CASZ1Q86V15 1759 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 UBE2Q2LH0YL09 131 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 PRC1O43663 620 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 ZAP70P43403 619 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CEP135Q66GS9 1140 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 ZFP91Q96JP5 570 aaPredicted RBP15.56■□□□□ 0.08
USP42-203ENST00000426246 HSPD1P10809 573 aaKnown RBP15.56■□□□□ 0.08
USP42-203ENST00000426246 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 ABCF2Q9UG63 623 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 JAG2Q9Y219 1238 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 SCN7AQ01118 1682 aa15.56■□□□□ 0.08
USP42-203ENST00000426246 CSF1RP07333 972 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 ZNF396Q96N95 335 aaPredicted RBP15.55■□□□□ 0.08
USP42-203ENST00000426246 CDHR2Q9BYE9 1310 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 SLC9C2Q5TAH2 1124 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 DZIP3Q86Y13 1208 aaKnown RBP15.55■□□□□ 0.08
USP42-203ENST00000426246 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 LRP5O75197 1615 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 ZNF213O14771 459 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 IMMTQ16891 758 aaKnown RBP15.55■□□□□ 0.08
USP42-203ENST00000426246 LINC00116Q8NCU8 138 aa15.55■□□□□ 0.08
USP42-203ENST00000426246 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 B4E1Z4 1266 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 KBTBD3Q8NAB2 608 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 OSBP2Q969R2 916 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 CLIC6Q96NY7 704 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 TM6SF1Q9BZW5 370 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 M0R2C6 588 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 NDUFA8P51970 172 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 SCARF1Q14162 830 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 SMARCC1Q92922 1105 aaPredicted RBP15.54■□□□□ 0.08
USP42-203ENST00000426246 PRIMPOLQ96LW4 560 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 DPCR1Q3MIW9 517 aa15.54■□□□□ 0.08
USP42-203ENST00000426246 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
USP42-203ENST00000426246 SLC3A2P08195 630 aaKnown RBP15.53■□□□□ 0.08
USP42-203ENST00000426246 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 FAM182BQ5T319 152 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 SYT10Q6XYQ8 523 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 NSUN7Q8NE18 718 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms