RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 TOB2Q14106 344 aaPredicted RBP20.65■□□□□ 0.9
FN1-208ENST00000426059 IMMTQ16891 758 aaKnown RBP20.65■□□□□ 0.9
FN1-208ENST00000426059 ZNF219Q9P2Y4 722 aaPredicted RBP20.65■□□□□ 0.9
FN1-208ENST00000426059 CTNNA3Q9UI47 895 aa20.65■□□□□ 0.9
FN1-208ENST00000426059 RIMBP2O15034 1052 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 ZNF804AQ7Z570 1209 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 EPB41L4AQ9HCS5 686 aaPredicted RBP20.64■□□□□ 0.89
FN1-208ENST00000426059 PODXL2Q9NZ53 605 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 ALDH1B1P30837 517 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 DYNLL1P63167 89 aaKnown RBP20.64■□□□□ 0.89
FN1-208ENST00000426059 MECOMQ03112 1051 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 ME3Q16798 604 aa20.64■□□□□ 0.89
FN1-208ENST00000426059 NAA16Q6N069 864 aaPredicted RBP20.64■□□□□ 0.89
FN1-208ENST00000426059 TDRD7Q8NHU6 1098 aaKnown RBP20.64■□□□□ 0.89
FN1-208ENST00000426059 ZNF213O14771 459 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 Q6ZUG5 572 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 NECAB1Q8N987 351 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 NSUN4Q96CB9 384 aaKnown RBP20.63■□□□□ 0.89
FN1-208ENST00000426059 CD209Q9NNX6 404 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 SLC4A4Q9Y6R1 1079 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 LRRC37AA6NMS7 1700 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 QSER1Q2KHR3 1735 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 GRIK5Q16478 980 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 CCDC83Q8IWF9 413 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 NBPF3Q9H094 633 aa20.63■□□□□ 0.89
FN1-208ENST00000426059 GSG1L2A8MUP6 293 aa20.62■□□□□ 0.89
FN1-208ENST00000426059 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
FN1-208ENST00000426059 H0YIN7 160 aa20.62■□□□□ 0.89
FN1-208ENST00000426059 IFNL3Q8IZI9 196 aa20.62■□□□□ 0.89
FN1-208ENST00000426059 SDR42E1Q8WUS8 393 aa20.62■□□□□ 0.89
FN1-208ENST00000426059 CIZ1Q9ULV3 898 aaPredicted RBP20.62■□□□□ 0.89
FN1-208ENST00000426059 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 STK3Q13188 491 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 C15orf52Q6ZUT6 534 aaKnown RBP20.61■□□□□ 0.89
FN1-208ENST00000426059 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
FN1-208ENST00000426059 TNPO1Q92973 898 aaKnown RBP20.61■□□□□ 0.89
FN1-208ENST00000426059 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 TBC1D10CQ8IV04 446 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 MPNDQ8N594 471 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 PDS5AQ29RF7 1337 aaKnown RBP20.6■□□□□ 0.89
FN1-208ENST00000426059 DHX32Q7L7V1 743 aaKnown RBP20.6■□□□□ 0.89
FN1-208ENST00000426059 TMC4Q7Z404 712 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 RIOK1Q9BRS2 568 aaKnown RBP20.6■□□□□ 0.89
FN1-208ENST00000426059 NAPBQ9H115 298 aa20.6■□□□□ 0.89
FN1-208ENST00000426059 CWC22Q9HCG8 908 aaKnown RBP20.6■□□□□ 0.89
FN1-208ENST00000426059 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 FGD1P98174 961 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
FN1-208ENST00000426059 IL27Q8NEV9 243 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
FN1-208ENST00000426059 BRF1Q92994 677 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 INTS4Q96HW7 963 aaKnown RBP20.59■□□□□ 0.89
FN1-208ENST00000426059 AATFQ9NY61 560 aaKnown RBP eCLIP20.59■□□□□ 0.892e-10■■■■■ 89.9
FN1-208ENST00000426059 CTDSPL2Q05D32 466 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 DPP8Q6V1X1 898 aaPredicted RBP20.59■□□□□ 0.89
FN1-208ENST00000426059 GPHNQ9NQX3 736 aaPredicted RBP20.59■□□□□ 0.89
FN1-208ENST00000426059 CCDC88AQ3V6T2 1871 aa20.59■□□□□ 0.89
FN1-208ENST00000426059 CHD4Q14839 1912 aa20.58■□□□□ 0.89
FN1-208ENST00000426059 TDO2P48775 406 aa20.58■□□□□ 0.89
FN1-208ENST00000426059 EXOSC10Q01780 885 aaKnown RBP20.58■□□□□ 0.89
FN1-208ENST00000426059 DUOX1Q9NRD9 1551 aa20.58■□□□□ 0.88
FN1-208ENST00000426059 SMIM22K7EJ46 135 aa20.58■□□□□ 0.88
FN1-208ENST00000426059 DZIP1Q86YF9 867 aaKnown RBP20.58■□□□□ 0.88
FN1-208ENST00000426059 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.88
FN1-208ENST00000426059 LDHBP07195 334 aaKnown RBP20.57■□□□□ 0.88
FN1-208ENST00000426059 HMGB1P09429 215 aaKnown RBP20.57■□□□□ 0.88
FN1-208ENST00000426059 IL1R1P14778 569 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
FN1-208ENST00000426059 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
FN1-208ENST00000426059 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
FN1-208ENST00000426059 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 TACC3Q9Y6A5 838 aa20.57■□□□□ 0.88
FN1-208ENST00000426059 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
FN1-208ENST00000426059 GNAT2P19087 354 aa20.56■□□□□ 0.88
FN1-208ENST00000426059 APOBRQ0VD83 1088 aa20.56■□□□□ 0.88
FN1-208ENST00000426059 ALX1Q15699 326 aa20.56■□□□□ 0.88
FN1-208ENST00000426059 SH2B1Q9NRF2 756 aaPredicted RBP20.56■□□□□ 0.88
FN1-208ENST00000426059 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
FN1-208ENST00000426059 STYK1Q6J9G0 422 aa20.56■□□□□ 0.88
FN1-208ENST00000426059 ZC3H12CQ9C0D7 883 aaKnown RBP20.56■□□□□ 0.88
FN1-208ENST00000426059 TMX4Q9H1E5 349 aaPredicted RBP20.56■□□□□ 0.88
FN1-208ENST00000426059 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
FN1-208ENST00000426059 NCOA7Q8NI08 942 aa20.55■□□□□ 0.88
FN1-208ENST00000426059 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
FN1-208ENST00000426059 ANTXR2P58335 489 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 GTF2IP78347 998 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 SPTY2D1Q68D10 685 aaPredicted RBP20.54■□□□□ 0.88
FN1-208ENST00000426059 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
FN1-208ENST00000426059 NACAP1Q9BZK3 213 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 NEDD4P46934 1319 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 SALL1Q9NSC2 1324 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 CYP2D7A0A087X1C5 515 aa20.54■□□□□ 0.88
FN1-208ENST00000426059 B4E1Z4 1266 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms