RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 LRP5O75197 1615 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 C10orf71Q711Q0 1435 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 PLIN1O60240 522 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 PDE8AO60658 829 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 NEFLP07196 543 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 RLBP1P12271 317 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 PANK1Q8TE04 598 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 NLRP3Q96P20 1036 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 USP44Q9H0E7 712 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 CD2APQ9Y5K6 639 aa8.78□□□□□ -1
EPHA4-206ENST00000424339 RTL9Q8NET4 1388 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 KLRG2A4D1S0 409 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-206ENST00000424339 IRS4O14654 1257 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-206ENST00000424339 ZBTB7BO15156 539 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-206ENST00000424339 GNAI2P04899 355 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 CD46P15529 392 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 JUNDP17535 347 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 CASP7P55210 303 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 TGFB2P61812 414 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 USP46P62068 366 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 CCDC152Q4G0S7 254 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-206ENST00000424339 FAM89AQ96GI7 184 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 COG6Q9Y2V7 657 aa8.77□□□□□ -1.01
EPHA4-206ENST00000424339 GDF11O95390 407 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 NBPF7P0C2Y1 421 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-206ENST00000424339 CTSWP56202 376 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 MTX1Q13505 466 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 SF3B3Q15393 1217 aaKnown RBP8.76□□□□□ -1.01
EPHA4-206ENST00000424339 RABL6Q3YEC7 729 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-206ENST00000424339 CRY2Q49AN0 593 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 ERFEQ4G0M1 354 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 ERICH6BQ5W0A0 696 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 MEIS3Q99687 375 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 ZBTB40Q9NUA8 1239 aa8.76□□□□□ -1.01
EPHA4-206ENST00000424339 DDX60Q8IY21 1712 aaKnown RBP8.76□□□□□ -1.01
EPHA4-206ENST00000424339 ABCC12Q96J65 1359 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 FAM177BA6PVY3 158 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 H0YIN7 160 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 HOXA10P31260 410 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 C20orf194Q5TEA3 1177 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 TMC4Q7Z404 712 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 RPAP2Q8IXW5 612 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 RPGRQ92834 1020 aaKnown RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 HLA-CQ95604 372 aa8.75□□□□□ -1.01
EPHA4-206ENST00000424339 PURBQ96QR8 312 aaKnown RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 PPP1R1BQ9UD71 204 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-206ENST00000424339 ANKRD31Q8N7Z5 1873 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 DLEC1Q9Y238 1755 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 HMMRO75330 724 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 CSF1RP07333 972 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 NPR1P16066 1061 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 ALDH1B1P30837 517 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 SH3BP2P78314 561 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 ERICH6Q7L0X2 663 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 CNKSR1Q969H4 720 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 MASTLQ96GX5 879 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 CRAMP1Q96RY5 1269 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 CDC5LQ99459 802 aaKnown RBP8.74□□□□□ -1.01
EPHA4-206ENST00000424339 TNNQ9UQP3 1299 aa8.74□□□□□ -1.01
EPHA4-206ENST00000424339 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 SOBPA7XYQ1 873 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 SRGNP10124 158 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 FOXO4P98177 505 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 RASSF7Q02833 373 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 IFIT5Q13325 482 aaKnown RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 RTL5Q5HYW3 569 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 RBM17Q96I25 401 aaKnown RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 SUCLG2Q96I99 432 aa8.73□□□□□ -1.01
EPHA4-206ENST00000424339 BICC1Q9H694 974 aaKnown RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 LRRFIP2Q9Y608 721 aaKnown RBP8.73□□□□□ -1.01
EPHA4-206ENST00000424339 TNRC6CQ9HCJ0 1690 aaKnown RBP8.72□□□□□ -1.01
EPHA4-206ENST00000424339 ANKRD18BA2A2Z9 1011 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 GPR37O15354 613 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 BBOX1O75936 387 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 GSK3AP49840 483 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 SOGA3Q5TF21 947 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 LMBR1LQ6UX01 489 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 C2CD5Q86YS7 1000 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
EPHA4-206ENST00000424339 KAZALD1Q96I82 304 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
EPHA4-206ENST00000424339 TMX4Q9H1E5 349 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-206ENST00000424339 SRGAP3O43295 1099 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 MAN1A2O60476 641 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 ITGA6P23229 1130 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms