RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KCNJ4P48050 445 aa8.27□□□□□ -1.09
SDCBP-203ENST00000424270 MAP3K9P80192 1104 aa8.27□□□□□ -1.09
SDCBP-203ENST00000424270 CFAP100Q494V2 611 aa8.27□□□□□ -1.09
SDCBP-203ENST00000424270 SNX27Q96L92 541 aa8.27□□□□□ -1.09
SDCBP-203ENST00000424270 ZCCHC17Q9NP64 241 aaKnown RBP8.27□□□□□ -1.09
SDCBP-203ENST00000424270 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
SDCBP-203ENST00000424270 MED23Q9ULK4 1368 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 PDHXO00330 501 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 TNPO2O14787 897 aaKnown RBP8.26□□□□□ -1.09
SDCBP-203ENST00000424270 CTGFP29279 349 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 AMER1Q5JTC6 1135 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-203ENST00000424270 C17orf99Q6UX52 265 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-203ENST00000424270 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 PRKAG2Q9UGJ0 569 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 LAMA3Q16787 3333 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 ADGRA2Q96PE1 1338 aa8.26□□□□□ -1.09
SDCBP-203ENST00000424270 TNNI2P48788 182 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 FLT3LGP49771 235 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 ERO1BQ86YB8 467 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 PIP4P2Q8N4L2 257 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 CDC5LQ99459 802 aaKnown RBP8.25□□□□□ -1.09
SDCBP-203ENST00000424270 PARK7Q99497 189 aaKnown RBP8.25□□□□□ -1.09
SDCBP-203ENST00000424270 C1QTNF1Q9BXJ1 281 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.25□□□□□ -1.098e-21■■■■■ 43.8
SDCBP-203ENST00000424270 SEMA6BQ9H3T3 888 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 PCDHAC2Q9Y5I4 1007 aa8.25□□□□□ -1.09
SDCBP-203ENST00000424270 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 TCP10L2B9ZVM9 353 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 IRF6O14896 467 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 CCT4P50991 539 aaKnown RBP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 ALYREFQ86V81 257 aaKnown RBP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 ADAMTS19Q8TE59 1207 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 ZBED3Q96IU2 234 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 WRNIP1Q96S55 665 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 UHRF1Q96T88 793 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-203ENST00000424270 PSME4Q14997 1843 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 COL4A1P02462 1669 aa8.24□□□□□ -1.09
SDCBP-203ENST00000424270 PDIA6Q15084 440 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 ANKRD23Q86SG2 305 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 ZKSCAN4Q969J2 545 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-203ENST00000424270 COA7Q96BR5 231 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 PRMT6Q96LA8 375 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-203ENST00000424270 CRISPLD2Q9H0B8 497 aa8.23□□□□□ -1.09
SDCBP-203ENST00000424270 PAK6Q9NQU5 681 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-203ENST00000424270 COL3A1P02461 1466 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-203ENST00000424270 LAMB1P07942 1786 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 HSPA5P11021 654 aaKnown RBP8.22□□□□□ -1.09
SDCBP-203ENST00000424270 PPIL2Q13356 520 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-203ENST00000424270 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.22□□□□□ -1.09
SDCBP-203ENST00000424270 SMCR8Q8TEV9 937 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-203ENST00000424270 TMEM39BQ9GZU3 492 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-203ENST00000424270 JAG2Q9Y219 1238 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 VCANP13611 3396 aa8.22□□□□□ -1.09
SDCBP-203ENST00000424270 PDE8AO60658 829 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 CYP2C8P10632 490 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
SDCBP-203ENST00000424270 LRP10Q7Z4F1 713 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 JARID2Q92833 1246 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-203ENST00000424270 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 TDRD3Q9H7E2 651 aaKnown RBP8.21□□□□□ -1.1
SDCBP-203ENST00000424270 CHPF2Q9P2E5 772 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 ZNF70Q9UC06 446 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-203ENST00000424270 MINPP1Q9UNW1 487 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 LEMD3Q9Y2U8 911 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 SNCAIPQ9Y6H5 919 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 OTOFQ9HC10 1997 aa8.21□□□□□ -1.1
SDCBP-203ENST00000424270 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 CDAN1Q8IWY9 1227 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 ATXN2LQ8WWM7 1075 aaKnown RBP8.2□□□□□ -1.1
SDCBP-203ENST00000424270 ANKRD2Q9GZV1 360 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 TMOD2Q9NZR1 351 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 THEGQ9P2T0 379 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
SDCBP-203ENST00000424270 SPTBN5Q9NRC6 3674 aaKnown RBP8.2□□□□□ -1.1
SDCBP-203ENST00000424270 HMGCRP04035 888 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 KLRK1P26718 216 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 MRPS5P82675 430 aaKnown RBP8.19□□□□□ -1.1
SDCBP-203ENST00000424270 PPATQ06203 517 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 IRF5Q13568 498 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 DCAF15Q66K64 600 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 ZNF804AQ7Z570 1209 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 CERS5Q8N5B7 392 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 USP38Q8NB14 1042 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 ASB2Q96Q27 587 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms