RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 MAST3O60307 1309 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 SEMA3EO15041 775 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 ECE1P42892 770 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
USP49-204ENST00000423567 GBA2Q9HCG7 927 aaPredicted RBP13.5□□□□□ -0.25
USP49-204ENST00000423567 SERPINA10Q9UK55 444 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 SUGT1Q9Y2Z0 365 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
USP49-204ENST00000423567 HMMRO75330 724 aa13.49□□□□□ -0.25
USP49-204ENST00000423567 NF2P35240 595 aa13.49□□□□□ -0.25
USP49-204ENST00000423567 TIMM10P62072 90 aa13.49□□□□□ -0.25
USP49-204ENST00000423567 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
USP49-204ENST00000423567 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
USP49-204ENST00000423567 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 ADORA1P30542 326 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 PHKA1P46020 1223 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 CRKP46108 304 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 VEGFBP49765 207 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
USP49-204ENST00000423567 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
USP49-204ENST00000423567 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
USP49-204ENST00000423567 TEKT1Q969V4 418 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
USP49-204ENST00000423567 NOP58Q9Y2X3 529 aaKnown RBP13.48□□□□□ -0.25
USP49-204ENST00000423567 HUNKP57058 714 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 GRM1Q13255 1194 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 TNFAIP1Q13829 316 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 CAPNS2Q96L46 248 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
USP49-204ENST00000423567 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 ZBTB40Q9NUA8 1239 aa13.47□□□□□ -0.25
USP49-204ENST00000423567 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
USP49-204ENST00000423567 WDR33Q9C0J8 1336 aaKnown RBP13.46□□□□□ -0.25
USP49-204ENST00000423567 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 LDHBP07195 334 aaKnown RBP13.46□□□□□ -0.25
USP49-204ENST00000423567 FKBP1BP68106 108 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.25
USP49-204ENST00000423567 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 C20orf194Q5TEA3 1177 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 MRIQ9BWK5 157 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
USP49-204ENST00000423567 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
USP49-204ENST00000423567 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
USP49-204ENST00000423567 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 COL1A1P02452 1464 aaPredicted RBP13.45□□□□□ -0.26
USP49-204ENST00000423567 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 GRIK5Q16478 980 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 SPTY2D1Q68D10 685 aaPredicted RBP13.45□□□□□ -0.26
USP49-204ENST00000423567 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
USP49-204ENST00000423567 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
USP49-204ENST00000423567 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 TNNI2P48788 182 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 TTC39AQ5SRH9 613 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 PRAMEF18Q5VWM3 479 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 AIDAQ96BJ3 306 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
USP49-204ENST00000423567 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 EXOC6BQ9Y2D4 811 aa13.44□□□□□ -0.26
USP49-204ENST00000423567 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
USP49-204ENST00000423567 GABBR2O75899 941 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 PRDX5P30044 214 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
USP49-204ENST00000423567 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 RGMBQ6NW40 437 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
USP49-204ENST00000423567 SPATA5Q8NB90 893 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
USP49-204ENST00000423567 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 PPP1R12BO60237 982 aaPredicted RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 ARID4AP29374 1257 aaPredicted RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 MAP2K2P36507 400 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 MAP2K1Q02750 393 aaPredicted RBP13.42□□□□□ -0.26
USP49-204ENST00000423567 RASA3Q14644 834 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
USP49-204ENST00000423567 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms